RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 GREM2Q9H772 168 aa25.46■■□□□ 1.67
CEACAM3-201ENST00000344550 ALDH1L1O75891 902 aa25.45■■□□□ 1.66
CEACAM3-201ENST00000344550 ATP2B4P23634 1241 aa25.45■■□□□ 1.66
CEACAM3-201ENST00000344550 EPS15P42566 896 aa25.45■■□□□ 1.66
CEACAM3-201ENST00000344550 CNTROBQ8N137 903 aa25.45■■□□□ 1.66
CEACAM3-201ENST00000344550 YDJCA8MPS7 323 aa25.44■■□□□ 1.66
CEACAM3-201ENST00000344550 UFL1O94874 794 aa25.44■■□□□ 1.66
CEACAM3-201ENST00000344550 RPS12P25398 132 aaKnown RBP25.44■■□□□ 1.66
CEACAM3-201ENST00000344550 GMPSP49915 693 aaPredicted RBP25.44■■□□□ 1.66
CEACAM3-201ENST00000344550 COL4A1P02462 1669 aa25.44■■□□□ 1.66
CEACAM3-201ENST00000344550 RAD17O75943 681 aa25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 CT47B1P0C2W7 299 aaPredicted RBP25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 IGHMBP2P38935 993 aaKnown RBP25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 ZC3H15Q8WU90 426 aaKnown RBP25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 CCDC85AQ96PX6 553 aaPredicted RBP25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 BCL2L13Q9BXK5 485 aa25.43■■□□□ 1.66
CEACAM3-201ENST00000344550 PTPRCP08575 1304 aa25.42■■□□□ 1.66
CEACAM3-201ENST00000344550 F6X3S4 739 aa25.42■■□□□ 1.66
CEACAM3-201ENST00000344550 HTRA3P83110 453 aa25.42■■□□□ 1.66
CEACAM3-201ENST00000344550 MINPP1Q9UNW1 487 aa25.42■■□□□ 1.66
CEACAM3-201ENST00000344550 RIMBP2O15034 1052 aa25.41■■□□□ 1.66
CEACAM3-201ENST00000344550 ECE2O60344 883 aa25.41■■□□□ 1.66
CEACAM3-201ENST00000344550 TRMT2AQ8IZ69 625 aaKnown RBP25.41■■□□□ 1.66
CEACAM3-201ENST00000344550 PGAP2Q9UHJ9 254 aa25.41■■□□□ 1.66
CEACAM3-201ENST00000344550 TMEM88BA6NKF7 163 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 G3V3G9 751 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 H7C1D1 291 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 GRM8O00222 908 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 ITGA6P23229 1130 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 ALDH1L2Q3SY69 923 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 DCAF8Q5TAQ9 597 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 SRCIN1Q9C0H9 1055 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 ANKRD2Q9GZV1 360 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 DBNDD1Q9H9R9 158 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 LEMD3Q9Y2U8 911 aa25.4■■□□□ 1.66
CEACAM3-201ENST00000344550 ZNF609O15014 1411 aa25.39■■□□□ 1.66
CEACAM3-201ENST00000344550 PODNQ7Z5L7 613 aa25.39■■□□□ 1.66
CEACAM3-201ENST00000344550 MPHOSPH8Q99549 860 aa25.39■■□□□ 1.66
CEACAM3-201ENST00000344550 CNOT7Q9UIV1 285 aaKnown RBP25.39■■□□□ 1.66
CEACAM3-201ENST00000344550 ANKRD18BA2A2Z9 1011 aa25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 PSMD14O00487 310 aa25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 VIL1P09327 827 aaKnown RBP25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 MAP1SQ66K74 1059 aaPredicted RBP25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 MRPL50Q8N5N7 158 aaKnown RBP25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 C9orf78Q9NZ63 289 aaPredicted RBP25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 MED23Q9ULK4 1368 aa25.38■■□□□ 1.65
CEACAM3-201ENST00000344550 FOXO4P98177 505 aa25.37■■□□□ 1.65
CEACAM3-201ENST00000344550 CCT4P50991 539 aaKnown RBP25.36■■□□□ 1.65
CEACAM3-201ENST00000344550 IFIT5Q13325 482 aaKnown RBP25.36■■□□□ 1.65
CEACAM3-201ENST00000344550 DOK7Q18PE1 504 aa25.36■■□□□ 1.65
CEACAM3-201ENST00000344550 FAM161AQ3B820 660 aa25.36■■□□□ 1.65
CEACAM3-201ENST00000344550 UTYO14607 1347 aa25.35■■□□□ 1.65
CEACAM3-201ENST00000344550 SLC4A10Q6U841 1118 aa25.34■■□□□ 1.65
CEACAM3-201ENST00000344550 MICALL2Q8IY33 904 aa25.34■■□□□ 1.65
CEACAM3-201ENST00000344550 AGBL3Q8NEM8 1001 aa25.34■■□□□ 1.65
CEACAM3-201ENST00000344550 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
CEACAM3-201ENST00000344550 MMP14P50281 582 aa25.33■■□□□ 1.65
CEACAM3-201ENST00000344550 CNTNAP1P78357 1384 aa25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 BRPF1P55201 1214 aaPredicted RBP25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 CCDC57Q2TAC2 916 aa25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 GPR101Q96P66 508 aaPredicted RBP25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 COA1Q9GZY4 146 aa25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 ZBTB12Q9Y330 459 aaPredicted RBP25.32■■□□□ 1.64
CEACAM3-201ENST00000344550 LMBR1LQ6UX01 489 aa25.31■■□□□ 1.64
CEACAM3-201ENST00000344550 CDCA7LQ96GN5 454 aa25.31■■□□□ 1.64
CEACAM3-201ENST00000344550 ZNF804BA4D1E1 1349 aa25.31■■□□□ 1.64
CEACAM3-201ENST00000344550 USP17L3A6NCW0 530 aa25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 USP17L4A6NCW7 530 aa25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 RSBN1LQ6PCB5 846 aaPredicted RBP25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 CDC37L1Q7L3B6 337 aa25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 USP17L1Q7RTZ2 530 aa25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 KCNQ5Q9NR82 932 aa25.3■■□□□ 1.64
CEACAM3-201ENST00000344550 RASSF10A6NK89 507 aa25.29■■□□□ 1.64
CEACAM3-201ENST00000344550 HIRAP54198 1017 aaPredicted RBP25.29■■□□□ 1.64
CEACAM3-201ENST00000344550 C15orf52Q6ZUT6 534 aaKnown RBP25.29■■□□□ 1.64
CEACAM3-201ENST00000344550 ZNF280AP59817 542 aaPredicted RBP25.28■■□□□ 1.64
CEACAM3-201ENST00000344550 CHRNDQ07001 517 aa25.28■■□□□ 1.64
CEACAM3-201ENST00000344550 TRPM4Q8TD43 1214 aa25.28■■□□□ 1.64
CEACAM3-201ENST00000344550 MYO3BQ8WXR4 1341 aa25.28■■□□□ 1.64
CEACAM3-201ENST00000344550 STRIP1Q5VSL9 837 aa25.27■■□□□ 1.64
CEACAM3-201ENST00000344550 GMLQ99445 158 aa25.27■■□□□ 1.64
CEACAM3-201ENST00000344550 SMC4Q9NTJ3 1288 aa25.27■■□□□ 1.64
CEACAM3-201ENST00000344550 CHMP3Q9Y3E7 222 aa25.27■■□□□ 1.64
CEACAM3-201ENST00000344550 SCN9AQ15858 1988 aa25.27■■□□□ 1.64
CEACAM3-201ENST00000344550 PSME4Q14997 1843 aa25.26■■□□□ 1.63
CEACAM3-201ENST00000344550 KCNJ4P48050 445 aa25.26■■□□□ 1.63
CEACAM3-201ENST00000344550 EPHA10Q5JZY3 1008 aa25.26■■□□□ 1.63
CEACAM3-201ENST00000344550 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
CEACAM3-201ENST00000344550 MKRN1Q9UHC7 482 aaKnown RBP25.26■■□□□ 1.63
CEACAM3-201ENST00000344550 DEFB115Q30KQ5 88 aa25.25■■□□□ 1.63
CEACAM3-201ENST00000344550 RABL6Q3YEC7 729 aaPredicted RBP25.25■■□□□ 1.63
CEACAM3-201ENST00000344550 TAF7LQ5H9L4 462 aa25.25■■□□□ 1.63
CEACAM3-201ENST00000344550 LDHAL6AQ6ZMR3 332 aa25.25■■□□□ 1.63
CEACAM3-201ENST00000344550 SPEF2Q9C093 1822 aa25.24■■□□□ 1.63
CEACAM3-201ENST00000344550 NBPF7P0C2Y1 421 aaPredicted RBP25.24■■□□□ 1.63
CEACAM3-201ENST00000344550 USP17L8P0C7I0 530 aa25.24■■□□□ 1.63
CEACAM3-201ENST00000344550 SAMD7Q7Z3H4 446 aa25.24■■□□□ 1.63
CEACAM3-201ENST00000344550 CST9Q5W186 159 aa25.23■■□□□ 1.63
CEACAM3-201ENST00000344550 KAZALD1Q96I82 304 aa25.23■■□□□ 1.63
CEACAM3-201ENST00000344550 SUCLG2Q96I99 432 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms