RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NUCKS1Q9H1E3 243 aaKnown RBP15.47■□□□□ 0.07
TRIO-202ENST00000344204 PDE11AQ9HCR9 933 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 GUCA1BQ9UMX6 200 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 GGNBP2Q9H3C7 697 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 CBX8Q9HC52 389 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 KRT83P78385 493 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 CETN2P41208 172 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
TRIO-202ENST00000344204 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 DDX41Q9UJV9 622 aaKnown RBP15.46■□□□□ 0.07
TRIO-202ENST00000344204 AKR1B10O60218 316 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 TACO1Q9BSH4 297 aaKnown RBP15.46■□□□□ 0.07
TRIO-202ENST00000344204 IL1RAPL2Q9NP60 686 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 FAM114A2Q9NRY5 505 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 PFDN1O60925 122 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIO-202ENST00000344204 TMEM63CQ9P1W3 806 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 MYO18AQ92614 2054 aaKnown RBP15.46■□□□□ 0.07
TRIO-202ENST00000344204 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 SMC6Q96SB8 1091 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 RABEP2Q9H5N1 569 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 SUFUQ9UMX1 484 aa15.46■□□□□ 0.07
TRIO-202ENST00000344204 PPP1R12BO60237 982 aaPredicted RBP15.46■□□□□ 0.06
TRIO-202ENST00000344204 CCDC40Q4G0X9 1142 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 BMP2KQ9NSY1 1161 aaPredicted RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 ATP8B1O43520 1251 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 LRRC23Q53EV4 343 aaPredicted RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 SPAG1Q07617 926 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 TRIM68Q6AZZ1 485 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 VIMP08670 466 aaKnown RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 NOP2P46087 812 aaKnown RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 TDRD12Q587J7 1177 aaKnown RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 SEC62Q99442 399 aaKnown RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 CUL7Q14999 1698 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 SMIM24O75264 130 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 AKR1B15C9JRZ8 316 aaPredicted RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
TRIO-202ENST00000344204 CEP120Q8N960 986 aa15.45■□□□□ 0.06
TRIO-202ENST00000344204 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
TRIO-202ENST00000344204 SPG7Q9UQ90 795 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 ZBTB17Q13105 803 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 CETN3O15182 167 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 ZMAT2Q96NC0 199 aaKnown RBP15.44■□□□□ 0.06
TRIO-202ENST00000344204 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 GUCY1B3Q02153 619 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 BAIAP2L1Q9UHR4 511 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 E7EVH7 732 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
TRIO-202ENST00000344204 HNRNPH2P55795 449 aaKnown RBP15.44■□□□□ 0.06
TRIO-202ENST00000344204 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
TRIO-202ENST00000344204 PHLDB2Q86SQ0 1253 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 CTNNBL1Q8WYA6 563 aaPredicted RBP15.43■□□□□ 0.06
TRIO-202ENST00000344204 RAB3IPQ96QF0 476 aaPredicted RBP15.43■□□□□ 0.06
TRIO-202ENST00000344204 KIF5AQ12840 1032 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
TRIO-202ENST00000344204 RAB3IL1Q8TBN0 382 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 RABGAP1Q9Y3P9 1069 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 NFE2L2Q16236 605 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 IFT20Q8IY31 132 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 CLSTN2Q9H4D0 955 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 CCT5P48643 541 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 LRRD1A4D1F6 860 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
TRIO-202ENST00000344204 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
TRIO-202ENST00000344204 GNGT1P63211 74 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 RASEFQ8IZ41 740 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 UBLCP1Q8WVY7 318 aaPredicted RBP15.42■□□□□ 0.06
TRIO-202ENST00000344204 PNMA6AP0CW24 399 aaPredicted RBP15.42■□□□□ 0.06
TRIO-202ENST00000344204 NACAP1Q9BZK3 213 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 ZHX3Q9H4I2 956 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 IRAK4Q9NWZ3 460 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 KIAA0753Q2KHM9 967 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 FYB1O15117 783 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 ARHGAP6O43182 974 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
TRIO-202ENST00000344204 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
TRIO-202ENST00000344204 HDGFL1Q5TGJ6 251 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
TRIO-202ENST00000344204 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■■□□ 15.9
TRIO-202ENST00000344204 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
TRIO-202ENST00000344204 TNNC1P63316 161 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 HSP90AA4PQ58FG1 418 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 GPT2Q8TD30 523 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
TRIO-202ENST00000344204 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 FCHSD2O94868 740 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 MUM1Q2TAK8 710 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 ZBTB22O15209 634 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 HIP1RO75146 1068 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 PPFIA4O75335 1185 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms