RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PIBF1Q8WXW3 757 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 ZHX3Q9H4I2 956 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 WDR81Q562E7 1941 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 SPECC1L-ADORA2AF8WAN1 911 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 NOP2P46087 812 aaKnown RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 DEUP1Q05D60 604 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 SDCCAG8Q86SQ7 713 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 AFAP1L2Q8N4X5 818 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 ATP2B1P20020 1258 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CABS1Q96KC9 395 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 NCAPGQ9BPX3 1015 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 RAB34Q9BZG1 259 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 MIA3Q5JRA6 1907 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 BLOC1S2Q6QNY1 142 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CROCCP2Q86T23 111 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CCDC144CPQ8IYA2 1237 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 NACADO15069 1562 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 SRGAP3O43295 1099 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 EVI5O60447 810 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 XRCC6P12956 609 aaKnown RBP eCLIP6.97□□□□□ -1.29
VCAN-203ENST00000343200 GNAI1P63096 354 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CCDC63Q8NA47 563 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 UTP11Q9Y3A2 253 aaKnown RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 CCDC88BA6NC98 1476 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CYLC1P35663 651 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 SESN3P58005 492 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 UBLCP1Q8WVY7 318 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 BLVRAP53004 296 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 NUCB1Q02818 461 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 PKD2Q13563 968 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 TRIM60Q495X7 471 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 GRAMD4Q6IC98 578 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 PNMA8AQ86V59 439 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 TSC22D3Q99576 134 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 HAUS8Q9BT25 410 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CAPN7Q9Y6W3 813 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 ADGBQ8N7X0 1667 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 KCNA4P22459 653 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 CLUL1Q15846 466 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 VPS52Q8N1B4 723 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 ABTB1Q969K4 478 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 SPDL1Q96EA4 605 aa6.97□□□□□ -1.29
VCAN-203ENST00000343200 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
VCAN-203ENST00000343200 RAD50Q92878 1312 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 FCHSD2O94868 740 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 KRT13P13646 458 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 AMPHP49418 695 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 NACAP1Q9BZK3 213 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 LMNAP02545 664 aaKnown RBP6.96□□□□□ -1.29
VCAN-203ENST00000343200 CKAP2LQ8IYA6 745 aa6.96□□□□□ -1.29
VCAN-203ENST00000343200 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 UBASH3AP57075 661 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 C16orf87Q6PH81 154 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 MPHOSPH9Q99550 1183 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 HDAC9Q9UKV0 1011 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 IKQ13123 557 aaPredicted RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 STK3Q13188 491 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 LMBR1Q8WVP7 490 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 SCOCQ9UIL1 159 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 MKL2Q9ULH7 1088 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 KIF13AQ9H1H9 1805 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 ZC3H6P61129 1189 aaKnown RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 KRT83P78385 493 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 CHD1LQ86WJ1 897 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 NUP205Q92621 2012 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 GNAI3P08754 354 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 HNRNPMP52272 730 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCAN-203ENST00000343200 IFT20Q8IY31 132 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 PANK3Q9H999 370 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 EVC2Q86UK5 1308 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 TNNC1P63316 161 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 CTTNBP2NLQ9P2B4 639 aa6.96□□□□□ -1.3
VCAN-203ENST00000343200 U3KPZ7 1027 aaPredicted RBP6.96□□□□□ -1.3
VCAN-203ENST00000343200 ESRRGP62508 458 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 RASIP1Q5U651 963 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 NBPF6Q5VWK0 638 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 HEATR3Q7Z4Q2 680 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 NBPF5PQ86XG9 351 aaPredicted RBP6.95□□□□□ -1.3
VCAN-203ENST00000343200 HELBQ8NG08 1087 aaPredicted RBP6.95□□□□□ -1.3
VCAN-203ENST00000343200 NBPF4Q96M43 638 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 CSB-PGBD3P0DP91 1061 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 TMCO4Q5TGY1 634 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 FRMD3A2A2Y4 597 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 SMIM23A6NLE4 172 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 PPP1R12AO14974 1030 aaPredicted RBP6.95□□□□□ -1.3
VCAN-203ENST00000343200 ARHGEF9O43307 516 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 IRX1P78414 480 aaPredicted RBP6.95□□□□□ -1.3
VCAN-203ENST00000343200 CCDC102BQ68D86 513 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 SPAG5Q96R06 1193 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 STRN4Q9NRL3 753 aa6.95□□□□□ -1.3
VCAN-203ENST00000343200 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms