RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ZBTB1Q9Y2K1 713 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 MBD3O95983 291 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 SDSP20132 328 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 POLA2Q14181 598 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 RASSF8Q8NHQ8 419 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
CAPRIN1-201ENST00000341394 PRPF40BQ6NWY9 871 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-201ENST00000341394 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
CAPRIN1-201ENST00000341394 ADCY5O95622 1261 aa12.37□□□□□ -0.43
CAPRIN1-201ENST00000341394 HSP90AA4PQ58FG1 418 aa12.37□□□□□ -0.43
CAPRIN1-201ENST00000341394 SYNE4Q8N205 404 aa12.37□□□□□ -0.43
CAPRIN1-201ENST00000341394 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 CCDC87Q9NVE4 849 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 TNMDQ9H2S6 317 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
CAPRIN1-201ENST00000341394 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 HLFQ16534 295 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 UTYO14607 1347 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 CPLX1O14810 134 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 CASP7P55210 303 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 NUP98P52948 1817 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 ITPK1Q13572 414 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-201ENST00000341394 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 KIF1BPQ96EK5 621 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 FAM89AQ96GI7 184 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 BIN1O00499 593 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 PDE1AP54750 535 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
CAPRIN1-201ENST00000341394 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 ME1P48163 572 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 RHPN1Q8TCX5 695 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 KLHL40Q2TBA0 621 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCDC112Q8NEF3 446 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 IL25Q9H293 177 aa12.33□□□□□ -0.44
CAPRIN1-201ENST00000341394 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 MTX1Q13505 466 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 SASH1O94885 1247 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 AACSQ86V21 672 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 MAP3K15Q6ZN16 1313 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 MX1P20591 662 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 IBSPP21815 317 aaPredicted RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZNF772Q68DY9 489 aaPredicted RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCDC82Q8N4S0 544 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
CAPRIN1-201ENST00000341394 GNPATO15228 680 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZPR1O75312 459 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 TRIM37O94972 964 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 TPM4P67936 248 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 AMIGO3Q86WK7 504 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 BTAF1O14981 1849 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 PDRG1Q9NUG6 133 aa12.31□□□□□ -0.44
CAPRIN1-201ENST00000341394 AK7Q96M32 723 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms