RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 POLR2AP24928 1970 aaKnown RBP21.83■■□□□ 1.08
BRCC3-202ENST00000340647 A0A1B0GUL6 1792 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 TRPM7Q96QT4 1865 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 NEXNQ0ZGT2 675 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 WASHC4Q2M389 1173 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 CIAPIN1Q6FI81 312 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 CNTROBQ8N137 903 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 LINS1Q8NG48 757 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 PLA2G12BQ9BX93 195 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 MYH16Q9H6N6 1097 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 DBNDD1Q9H9R9 158 aa21.82■■□□□ 1.08
BRCC3-202ENST00000340647 MKRN1Q9UHC7 482 aaKnown RBP21.82■■□□□ 1.08
BRCC3-202ENST00000340647 BEND3Q5T5X7 828 aa21.81■■□□□ 1.08
BRCC3-202ENST00000340647 C6orf229H3BNL8 230 aa21.8■■□□□ 1.08
BRCC3-202ENST00000340647 HSP90B1P14625 803 aaKnown RBP21.8■■□□□ 1.08
BRCC3-202ENST00000340647 HIRAP54198 1017 aaPredicted RBP21.8■■□□□ 1.08
BRCC3-202ENST00000340647 DOK7Q18PE1 504 aa21.8■■□□□ 1.08
BRCC3-202ENST00000340647 CLEC11AQ9Y240 323 aa21.8■■□□□ 1.08
BRCC3-202ENST00000340647 CSF1RP07333 972 aa21.79■■□□□ 1.08
BRCC3-202ENST00000340647 USP50Q70EL3 339 aaPredicted RBP21.79■■□□□ 1.08
BRCC3-202ENST00000340647 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
BRCC3-202ENST00000340647 PSMD14O00487 310 aa21.78■■□□□ 1.08
BRCC3-202ENST00000340647 LMOD1P29536 600 aaPredicted RBP21.78■■□□□ 1.08
BRCC3-202ENST00000340647 ANKRD18AQ8IVF6 992 aa21.78■■□□□ 1.08
BRCC3-202ENST00000340647 ECE2O60344 883 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 FOXO4P98177 505 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 TRPM4Q8TD43 1214 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 CDCA7LQ96GN5 454 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 ADARB2Q9NS39 739 aaKnown RBP21.77■■□□□ 1.08
BRCC3-202ENST00000340647 PGAP2Q9UHJ9 254 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
BRCC3-202ENST00000340647 UFL1O94874 794 aa21.76■■□□□ 1.07
BRCC3-202ENST00000340647 EGFRP00533 1210 aa21.76■■□□□ 1.07
BRCC3-202ENST00000340647 SLFN5Q08AF3 891 aa21.76■■□□□ 1.07
BRCC3-202ENST00000340647 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
BRCC3-202ENST00000340647 EPHA10Q5JZY3 1008 aa21.76■■□□□ 1.07
BRCC3-202ENST00000340647 BSDC1Q9NW68 430 aaPredicted RBP21.76■■□□□ 1.07
BRCC3-202ENST00000340647 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
BRCC3-202ENST00000340647 TNIP1Q15025 636 aa21.75■■□□□ 1.07
BRCC3-202ENST00000340647 TRMT2AQ8IZ69 625 aaKnown RBP21.75■■□□□ 1.07
BRCC3-202ENST00000340647 MRPL50Q8N5N7 158 aaKnown RBP21.75■■□□□ 1.07
BRCC3-202ENST00000340647 ANKIB1Q9P2G1 1089 aa21.75■■□□□ 1.07
BRCC3-202ENST00000340647 CNOT7Q9UIV1 285 aaKnown RBP21.75■■□□□ 1.07
BRCC3-202ENST00000340647 GGA1Q9UJY5 639 aa21.75■■□□□ 1.07
BRCC3-202ENST00000340647 XDHP47989 1333 aa21.75■■□□□ 1.07
BRCC3-202ENST00000340647 TRAF5O00463 557 aa21.74■■□□□ 1.07
BRCC3-202ENST00000340647 FOXN1O15353 648 aa21.74■■□□□ 1.07
BRCC3-202ENST00000340647 CDC5LQ99459 802 aaKnown RBP21.74■■□□□ 1.07
BRCC3-202ENST00000340647 EYA3Q99504 573 aa21.74■■□□□ 1.07
BRCC3-202ENST00000340647 TMEM88BA6NKF7 163 aa21.73■■□□□ 1.07
BRCC3-202ENST00000340647 ITGA6P23229 1130 aa21.73■■□□□ 1.07
BRCC3-202ENST00000340647 CST9Q5W186 159 aa21.73■■□□□ 1.07
BRCC3-202ENST00000340647 DPF2Q92785 391 aa21.73■■□□□ 1.07
BRCC3-202ENST00000340647 CCER2I3L3R5 266 aa21.72■■□□□ 1.07
BRCC3-202ENST00000340647 VIL1P09327 827 aaKnown RBP21.72■■□□□ 1.07
BRCC3-202ENST00000340647 TXNRD3Q86VQ6 643 aa21.72■■□□□ 1.07
BRCC3-202ENST00000340647 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
BRCC3-202ENST00000340647 KAZALD1Q96I82 304 aa21.72■■□□□ 1.07
BRCC3-202ENST00000340647 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
BRCC3-202ENST00000340647 ZC3H12CQ9C0D7 883 aaKnown RBP21.72■■□□□ 1.07
BRCC3-202ENST00000340647 E9PSI1 815 aa21.71■■□□□ 1.07
BRCC3-202ENST00000340647 ATP2B4P23634 1241 aa21.71■■□□□ 1.07
BRCC3-202ENST00000340647 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
BRCC3-202ENST00000340647 KLRK1P26718 216 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 VEGFBP49765 207 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 DLK2Q6UY11 383 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 SSH1Q8WYL5 1049 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 GMLQ99445 158 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 IRS2Q9Y4H2 1338 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 ZNF609O15014 1411 aa21.7■■□□□ 1.06
BRCC3-202ENST00000340647 GRM8O00222 908 aa21.69■■□□□ 1.06
BRCC3-202ENST00000340647 CCT4P50991 539 aaKnown RBP21.69■■□□□ 1.06
BRCC3-202ENST00000340647 GLIS2Q9BZE0 524 aaPredicted RBP21.69■■□□□ 1.06
BRCC3-202ENST00000340647 MED23Q9ULK4 1368 aa21.69■■□□□ 1.06
BRCC3-202ENST00000340647 RASSF10A6NK89 507 aa21.68■■□□□ 1.06
BRCC3-202ENST00000340647 SNAP23O00161 211 aa21.68■■□□□ 1.06
BRCC3-202ENST00000340647 ALDH1L1O75891 902 aa21.67■■□□□ 1.06
BRCC3-202ENST00000340647 ZC3H15Q8WU90 426 aaKnown RBP21.67■■□□□ 1.06
BRCC3-202ENST00000340647 UTYO14607 1347 aa21.66■■□□□ 1.06
BRCC3-202ENST00000340647 H7C1D1 291 aa21.66■■□□□ 1.06
BRCC3-202ENST00000340647 NBPF7P0C2Y1 421 aaPredicted RBP21.66■■□□□ 1.06
BRCC3-202ENST00000340647 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
BRCC3-202ENST00000340647 TBC1D10BQ4KMP7 808 aaPredicted RBP21.66■■□□□ 1.06
BRCC3-202ENST00000340647 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
BRCC3-202ENST00000340647 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
BRCC3-202ENST00000340647 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
BRCC3-202ENST00000340647 ASTN2O75129 1339 aaPredicted RBP21.65■■□□□ 1.06
BRCC3-202ENST00000340647 IGHMBP2P38935 993 aaKnown RBP21.65■■□□□ 1.06
BRCC3-202ENST00000340647 CHRNDQ07001 517 aa21.65■■□□□ 1.06
BRCC3-202ENST00000340647 RSBN1LQ6PCB5 846 aaPredicted RBP21.65■■□□□ 1.06
BRCC3-202ENST00000340647 SUCLG2Q96I99 432 aa21.65■■□□□ 1.06
BRCC3-202ENST00000340647 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
BRCC3-202ENST00000340647 MXD3Q9BW11 206 aa21.65■■□□□ 1.06
BRCC3-202ENST00000340647 SRCIN1Q9C0H9 1055 aa21.65■■□□□ 1.06
BRCC3-202ENST00000340647 PRDM10Q9NQV6 1147 aa21.65■■□□□ 1.06
BRCC3-202ENST00000340647 ZNF280AP59817 542 aaPredicted RBP21.64■■□□□ 1.05
BRCC3-202ENST00000340647 PODNQ7Z5L7 613 aa21.64■■□□□ 1.05
BRCC3-202ENST00000340647 WBP1LQ9NX94 342 aa21.64■■□□□ 1.05
BRCC3-202ENST00000340647 LEMD3Q9Y2U8 911 aa21.64■■□□□ 1.05
BRCC3-202ENST00000340647 ZNF804BA4D1E1 1349 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms