RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 RAB11FIP4Q86YS3 637 aa29.42■■■□□ 2.3
AGAP1-202ENST00000336665 PPM1EQ8WY54 764 aa29.42■■■□□ 2.3
AGAP1-202ENST00000336665 BRF1Q92994 677 aa29.42■■■□□ 2.3
AGAP1-202ENST00000336665 PLS1Q14651 629 aa29.42■■■□□ 2.3
AGAP1-202ENST00000336665 N4BP3O15049 544 aa29.41■■■□□ 2.3
AGAP1-202ENST00000336665 ALG1Q9BT22 464 aa29.41■■■□□ 2.3
AGAP1-202ENST00000336665 TTC12Q9H892 705 aaPredicted RBP29.41■■■□□ 2.3
AGAP1-202ENST00000336665 AKR1B10O60218 316 aa29.41■■■□□ 2.3
AGAP1-202ENST00000336665 MCMDC2Q4G0Z9 681 aa29.41■■■□□ 2.3
AGAP1-202ENST00000336665 SLC9C2Q5TAH2 1124 aa29.41■■■□□ 2.3
AGAP1-202ENST00000336665 BBXQ8WY36 941 aaPredicted RBP29.41■■■□□ 2.3
AGAP1-202ENST00000336665 MMRN2Q9H8L6 949 aa29.4■■■□□ 2.3
AGAP1-202ENST00000336665 SPAG1Q07617 926 aa29.4■■■□□ 2.3
AGAP1-202ENST00000336665 TBC1D9Q6ZT07 1266 aa29.4■■■□□ 2.3
AGAP1-202ENST00000336665 ZNF354CQ86Y25 554 aa29.4■■■□□ 2.3
AGAP1-202ENST00000336665 BCCIPQ9P287 314 aaKnown RBP eCLIP29.4■■■□□ 2.38e-8■■■■■ 33.8
AGAP1-202ENST00000336665 LRRC59Q96AG4 307 aaKnown RBP29.4■■■□□ 2.3
AGAP1-202ENST00000336665 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
AGAP1-202ENST00000336665 SYKP43405 635 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 WDR7Q9Y4E6 1490 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 RTL9Q8NET4 1388 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 RRAGBQ5VZM2 374 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 PSMD1Q99460 953 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 CALML3P27482 149 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 SREK1Q8WXA9 508 aaKnown RBP29.39■■■□□ 2.3
AGAP1-202ENST00000336665 CTAGE1Q96RT6 745 aa29.39■■■□□ 2.3
AGAP1-202ENST00000336665 NSFL1CQ9UNZ2 370 aaKnown RBP29.39■■■□□ 2.3
AGAP1-202ENST00000336665 LARP6Q9BRS8 491 aaKnown RBP29.39■■■□□ 2.29
AGAP1-202ENST00000336665 KIAA0753Q2KHM9 967 aa29.38■■■□□ 2.29
AGAP1-202ENST00000336665 SLC39A6Q13433 755 aa29.38■■■□□ 2.29
AGAP1-202ENST00000336665 RRP36Q96EU6 259 aaKnown RBP29.38■■■□□ 2.29
AGAP1-202ENST00000336665 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.38■■■□□ 2.291e-6■■□□□ 13
AGAP1-202ENST00000336665 KCNG4Q8TDN1 519 aa29.38■■■□□ 2.29
AGAP1-202ENST00000336665 C19orf44Q9H6X5 657 aa29.38■■■□□ 2.29
AGAP1-202ENST00000336665 RBM26Q5T8P6 1007 aaKnown RBP29.38■■■□□ 2.29
AGAP1-202ENST00000336665 CCDC175P0C221 793 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 LRSAM1Q6UWE0 723 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 SSFA2P28290 1259 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 PRPHP41219 470 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 SH2D4AQ9H788 454 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 KDM5BQ9UGL1 1544 aa29.37■■■□□ 2.29
AGAP1-202ENST00000336665 GTPBP4Q9BZE4 634 aaKnown RBP29.36■■■□□ 2.29
AGAP1-202ENST00000336665 PCF11O94913 1555 aaKnown RBP29.36■■■□□ 2.29
AGAP1-202ENST00000336665 C20orf194Q5TEA3 1177 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 MICALCLQ6ZW33 695 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 RALGAPBQ86X10 1494 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 ZNF165P49910 485 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 UBE2HP62256 183 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 RBM17Q96I25 401 aaKnown RBP29.35■■■□□ 2.29
AGAP1-202ENST00000336665 PSMA7O14818 248 aa29.35■■■□□ 2.29
AGAP1-202ENST00000336665 APBB1IPQ7Z5R6 666 aaPredicted RBP29.35■■■□□ 2.29
AGAP1-202ENST00000336665 KRT79Q5XKE5 535 aa29.34■■■□□ 2.29
AGAP1-202ENST00000336665 CYLC1P35663 651 aaPredicted RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 PPP1R14CQ8TAE6 165 aa29.33■■■□□ 2.29
AGAP1-202ENST00000336665 MRPS9P82933 396 aaKnown RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 DHX37Q8IY37 1157 aaKnown RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 LINS1Q8NG48 757 aa29.33■■■□□ 2.29
AGAP1-202ENST00000336665 CDCA7Q9BWT1 371 aaPredicted RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 LDHBP07195 334 aaKnown RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 JADE2Q9NQC1 790 aa29.33■■■□□ 2.29
AGAP1-202ENST00000336665 IRS4O14654 1257 aaPredicted RBP29.33■■■□□ 2.29
AGAP1-202ENST00000336665 MCM9Q9NXL9 1143 aa29.33■■■□□ 2.29
AGAP1-202ENST00000336665 STK32BQ9NY57 414 aa29.33■■■□□ 2.29
AGAP1-202ENST00000336665 MSANTD4Q8NCY6 345 aa29.32■■■□□ 2.28
AGAP1-202ENST00000336665 ASIC1P78348 528 aa29.32■■■□□ 2.28
AGAP1-202ENST00000336665 DCAF5Q96JK2 942 aa29.32■■■□□ 2.28
AGAP1-202ENST00000336665 TTC6Q86TZ1 520 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 PAG1Q9NWQ8 432 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 USP25Q9UHP3 1055 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 TAF12Q16514 161 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 TRAPPC3LQ5T215 181 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 NAP1L4Q99733 375 aaKnown RBP29.31■■■□□ 2.28
AGAP1-202ENST00000336665 MRVI1Q9Y6F6 885 aa29.31■■■□□ 2.28
AGAP1-202ENST00000336665 GNA11P29992 359 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 FAM13AO94988 1023 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 ATP8B2P98198 1209 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 RBM8AQ9Y5S9 174 aaKnown RBP29.3■■■□□ 2.28
AGAP1-202ENST00000336665 RIMS2Q9UQ26 1411 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 TNPO1Q92973 898 aaKnown RBP29.3■■■□□ 2.28
AGAP1-202ENST00000336665 TRMT1Q9NXH9 659 aaKnown RBP29.3■■■□□ 2.28
AGAP1-202ENST00000336665 AFMP43652 599 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 TSHZ3Q63HK5 1081 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 CEP63Q96MT8 703 aa29.3■■■□□ 2.28
AGAP1-202ENST00000336665 BIN2Q9UBW5 565 aaPredicted RBP29.3■■■□□ 2.28
AGAP1-202ENST00000336665 PLCH2O75038 1416 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 PCDH11XQ9BZA7 1347 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 PCDH11YQ9BZA8 1340 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 HS2ST1Q7LGA3 356 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 FLT4P35916 1363 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 TRIM75PA6NK02 468 aa29.29■■■□□ 2.28
AGAP1-202ENST00000336665 CKAP4Q07065 602 aaKnown RBP29.29■■■□□ 2.28
AGAP1-202ENST00000336665 SPECC1LQ69YQ0 1117 aa29.28■■■□□ 2.28
AGAP1-202ENST00000336665 MEIS3Q99687 375 aa29.28■■■□□ 2.28
AGAP1-202ENST00000336665 MAATS1Q7Z4T9 603 aa29.28■■■□□ 2.28
AGAP1-202ENST00000336665 CCDC117Q8IWD4 279 aaPredicted RBP29.28■■■□□ 2.28
AGAP1-202ENST00000336665 CCDC155Q8N6L0 562 aa29.27■■■□□ 2.28
AGAP1-202ENST00000336665 RIMBP2O15034 1052 aa29.27■■■□□ 2.28
AGAP1-202ENST00000336665 ISM2Q6H9L7 571 aa29.27■■■□□ 2.28
AGAP1-202ENST00000336665 SELENOOQ9BVL4 669 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms