RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 KIF5BP33176 963 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.11■□□□□ 0.494e-6■■■■□ 22.9
HDAC5-202ENST00000336057 PTPDC1A2A3K4 754 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 TMTC2Q8N394 836 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 KCNA6P17658 529 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 MAP9Q49MG5 647 aa18.11■□□□□ 0.49
HDAC5-202ENST00000336057 KIAA0754O94854 1291 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 GNG11P61952 73 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 CENPHQ9H3R5 247 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 MARCKSP29966 332 aaPredicted RBP18.1■□□□□ 0.49
HDAC5-202ENST00000336057 ZNF76P36508 570 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 TAF3Q5VWG9 929 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 CACNA2D4Q7Z3S7 1137 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 TSG101Q99816 390 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 GSPT1P15170 499 aaKnown RBP18.1■□□□□ 0.49
HDAC5-202ENST00000336057 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
HDAC5-202ENST00000336057 CFAP65Q6ZU64 1925 aaKnown RBP18.09■□□□□ 0.49
HDAC5-202ENST00000336057 ABCA8O94911 1581 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 FGFR1OPO95684 399 aaKnown RBP18.09■□□□□ 0.49
HDAC5-202ENST00000336057 PDE4BQ07343 736 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 CHST3Q7LGC8 479 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 MCM3P25205 808 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 TMEM266Q2M3C6 531 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 SAMD9LQ8IVG5 1584 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 PTGS1P23219 599 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 RTN1Q16799 776 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
HDAC5-202ENST00000336057 UBA7P41226 1012 aa18.08■□□□□ 0.49
HDAC5-202ENST00000336057 BMS1Q14692 1282 aaKnown RBP18.08■□□□□ 0.49
HDAC5-202ENST00000336057 SEPT11Q9NVA2 429 aaKnown RBP18.08■□□□□ 0.49
HDAC5-202ENST00000336057 USO1O60763 962 aaKnown RBP18.08■□□□□ 0.48
HDAC5-202ENST00000336057 BMP15O95972 392 aa18.08■□□□□ 0.48
HDAC5-202ENST00000336057 LUZP1Q86V48 1076 aa18.08■□□□□ 0.48
HDAC5-202ENST00000336057 MYO5CQ9NQX4 1742 aa18.08■□□□□ 0.48
HDAC5-202ENST00000336057 MPHOSPH10O00566 681 aaKnown RBP18.08■□□□□ 0.48
HDAC5-202ENST00000336057 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
HDAC5-202ENST00000336057 PRKCSHP14314 528 aaPredicted RBP18.08■□□□□ 0.48
HDAC5-202ENST00000336057 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
HDAC5-202ENST00000336057 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 SLC27A2O14975 620 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 ESR2Q92731 530 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 POLR3GO15318 223 aaPredicted RBP18.07■□□□□ 0.48
HDAC5-202ENST00000336057 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 MTIF2P46199 727 aaKnown RBP18.07■□□□□ 0.48
HDAC5-202ENST00000336057 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
HDAC5-202ENST00000336057 KAT14Q9H8E8 782 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 N4BP3O15049 544 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 HSPA4P34932 840 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 ATL3Q6DD88 541 aa18.07■□□□□ 0.48
HDAC5-202ENST00000336057 BRAPQ7Z569 592 aa18.06■□□□□ 0.48
HDAC5-202ENST00000336057 PPP1R12BO60237 982 aaPredicted RBP18.06■□□□□ 0.48
HDAC5-202ENST00000336057 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
HDAC5-202ENST00000336057 HELLSQ9NRZ9 838 aa18.06■□□□□ 0.48
HDAC5-202ENST00000336057 CYP7A1P22680 504 aa18.06■□□□□ 0.48
HDAC5-202ENST00000336057 AMPD3Q01432 767 aa18.06■□□□□ 0.48
HDAC5-202ENST00000336057 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 DNAI1Q9UI46 699 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 ARHGEF10O15013 1369 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 LDHCP07864 332 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 HSP90AA4PQ58FG1 418 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 CALML4Q96GE6 196 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 FAM227BQ96M60 508 aa18.05■□□□□ 0.48
HDAC5-202ENST00000336057 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-202ENST00000336057 TUBB4AP04350 444 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 PAFAH1B1P43034 410 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 AFMP43652 599 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 TNNI3KQ59H18 835 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 METTL22Q9BUU2 404 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-202ENST00000336057 CRNKL1Q9BZJ0 848 aaKnown RBP18.04■□□□□ 0.48
HDAC5-202ENST00000336057 FPGT-TNNI3KV9GXZ4 949 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 BRD1O95696 1058 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 CTAGE1Q96RT6 745 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 KIF20AO95235 890 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-202ENST00000336057 IFIT1BQ5T764 474 aaKnown RBP18.04■□□□□ 0.48
HDAC5-202ENST00000336057 SLF2Q8IX21 1173 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 RMND1Q9NWS8 449 aa18.04■□□□□ 0.48
HDAC5-202ENST00000336057 MYOM2P54296 1465 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 BAG3O95817 575 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 TDRD12Q587J7 1177 aaKnown RBP18.03■□□□□ 0.48
HDAC5-202ENST00000336057 FAM114A1Q8IWE2 563 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 TMEM132AQ24JP5 1023 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 SPTY2D1Q68D10 685 aaPredicted RBP18.03■□□□□ 0.48
HDAC5-202ENST00000336057 KLHDC4Q8TBB5 520 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms