RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 JAG2Q9Y219 1238 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 CROCC2H7BZ55 1655 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 CCAR1Q8IX12 1150 aaKnown RBP17.03■□□□□ 0.32
FGFR1-202ENST00000335922 A0A087WWV3 80 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
FGFR1-202ENST00000335922 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
FGFR1-202ENST00000335922 CEP152O94986 1710 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 Q6ZUG5 572 aa17.03■□□□□ 0.32
FGFR1-202ENST00000335922 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
FGFR1-202ENST00000335922 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
FGFR1-202ENST00000335922 UVSSAQ2YD98 709 aa17.02■□□□□ 0.32
FGFR1-202ENST00000335922 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
FGFR1-202ENST00000335922 USP5P45974 858 aa17.02■□□□□ 0.32
FGFR1-202ENST00000335922 LRMPQ12912 555 aa17.02■□□□□ 0.32
FGFR1-202ENST00000335922 SPATA31A3Q5VYP0 1347 aa17.02■□□□□ 0.31
FGFR1-202ENST00000335922 JAK2O60674 1132 aa17.02■□□□□ 0.31
FGFR1-202ENST00000335922 MAP3K12Q12852 859 aa17.02■□□□□ 0.31
FGFR1-202ENST00000335922 ATP2B3Q16720 1220 aa17.02■□□□□ 0.31
FGFR1-202ENST00000335922 CFAP100Q494V2 611 aa17.02■□□□□ 0.31
FGFR1-202ENST00000335922 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 CCDC66A2RUB6 948 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 RUFY3Q7L099 469 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
FGFR1-202ENST00000335922 LIG1P18858 919 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 HSPA4P34932 840 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 KRT32Q14532 448 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 TCEAL9Q9UHQ7 104 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 MADDQ8WXG6 1647 aa17.01■□□□□ 0.31
FGFR1-202ENST00000335922 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.311e-11■□□□□ 9.6
FGFR1-202ENST00000335922 HSP90B2PQ58FF3 399 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 DIP2BQ9P265 1576 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 RIOK3O14730 519 aaKnown RBP17■□□□□ 0.31
FGFR1-202ENST00000335922 TRIM37O94972 964 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 LARGE1O95461 756 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 ME3Q16798 604 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
FGFR1-202ENST00000335922 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
FGFR1-202ENST00000335922 RAD50Q92878 1312 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 TMC6Q7Z403 805 aa17■□□□□ 0.31
FGFR1-202ENST00000335922 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
FGFR1-202ENST00000335922 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
FGFR1-202ENST00000335922 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 PRIMPOLQ96LW4 560 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 NAPBQ9H115 298 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 WDR17Q8IZU2 1322 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
FGFR1-202ENST00000335922 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
FGFR1-202ENST00000335922 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 SKILP12757 684 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
FGFR1-202ENST00000335922 MSL1Q68DK7 614 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 TTLL7Q6ZT98 887 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 ZNF594Q96JF6 807 aaPredicted RBP16.98■□□□□ 0.31
FGFR1-202ENST00000335922 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
FGFR1-202ENST00000335922 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
FGFR1-202ENST00000335922 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 ABCA6Q8N139 1617 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 URI1O94763 535 aaPredicted RBP16.98■□□□□ 0.31
FGFR1-202ENST00000335922 ZSWIM4Q9H7M6 989 aa16.98■□□□□ 0.31
FGFR1-202ENST00000335922 POLR3GO15318 223 aaPredicted RBP16.97■□□□□ 0.31
FGFR1-202ENST00000335922 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
FGFR1-202ENST00000335922 MARCKSP29966 332 aaPredicted RBP16.97■□□□□ 0.31
FGFR1-202ENST00000335922 TIMM10P62072 90 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 KLHL10Q6JEL2 608 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 GOLGA8BA8MQT2 603 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 RIMBP2O15034 1052 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 UNC13BO14795 1591 aa16.97■□□□□ 0.31
FGFR1-202ENST00000335922 RXRAP19793 462 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 CEP135Q66GS9 1140 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 PYCARDQ9ULZ3 195 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
FGFR1-202ENST00000335922 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
FGFR1-202ENST00000335922 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
FGFR1-202ENST00000335922 ATP7BP35670 1465 aa16.96■□□□□ 0.31
FGFR1-202ENST00000335922 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.3
FGFR1-202ENST00000335922 TFCP2Q12800 502 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms