RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 TAF7LQ5H9L4 462 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 A0A087WZG4 1122 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 PTPDC1A2A3K4 754 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 ATP5J2-PTCD1G3V325 749 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 GOLIM4O00461 696 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 NPHP1O15259 732 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 PTCD1O75127 700 aaKnown RBP10.2□□□□□ -0.78
LIMK2-201ENST00000331728 TAF5LO75529 589 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 SKILP12757 684 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 KCNB2Q92953 911 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 DDX41Q9UJV9 622 aaKnown RBP10.2□□□□□ -0.78
LIMK2-201ENST00000331728 DIP2BQ9P265 1576 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 PIP4K2AP48426 406 aaPredicted RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 APOBRQ0VD83 1088 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 TOB2Q14106 344 aaPredicted RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 CACTINQ8WUQ7 758 aaKnown RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 DBNDD2Q9BQY9 259 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 AOPEPQ8N6M6 819 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 KIF18AQ8NI77 898 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 CEMIPQ8WUJ3 1361 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
LIMK2-201ENST00000331728 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 GCP02774 474 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 CDC25BP30305 580 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 GCKRQ14397 625 aa10.19□□□□□ -0.78
LIMK2-201ENST00000331728 SETD1BQ9UPS6 1966 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 NEURL1BA8MQ27 555 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 ATP5JP18859 108 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 DHX32Q7L7V1 743 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 ZNF397Q8NF99 534 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 SEC62Q99442 399 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 RESTQ13127 1097 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 RBM43Q6ZSC3 357 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 KRT222Q8N1A0 295 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 USP16Q9Y5T5 823 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 DHX16O60231 1041 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 GSDMDP57764 484 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 MRPS27Q92552 414 aaKnown RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 PGBD1Q96JS3 809 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 METTL22Q9BUU2 404 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 TAF6LQ9Y6J9 622 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 MORC2Q9Y6X9 1032 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 V9GYY5 206 aaPredicted RBP10.18□□□□□ -0.78
LIMK2-201ENST00000331728 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
LIMK2-201ENST00000331728 NALCNQ8IZF0 1738 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 IFIT1P09914 478 aaKnown RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 C8orf76Q96K31 380 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 LLPHQ9BRT6 129 aaKnown RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 DBNLQ9UJU6 430 aaKnown RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 FAM160A1Q05DH4 1040 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 LMBR1LQ6UX01 489 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 CCDC144CPQ8IYA2 1237 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 BIN1O00499 593 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 TRDNQ13061 729 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 NAA16Q6N069 864 aaPredicted RBP10.17□□□□□ -0.78
LIMK2-201ENST00000331728 CHST3Q7LGC8 479 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 ANKLE2Q86XL3 938 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
LIMK2-201ENST00000331728 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 CCDC66A2RUB6 948 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 CYP21A2P08686 494 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 SNRPA1P09661 255 aaKnown RBP10.16□□□□□ -0.78
LIMK2-201ENST00000331728 SCRN1Q12765 414 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 TMC6Q7Z403 805 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 POLR3DP05423 398 aaPredicted RBP10.16□□□□□ -0.78
LIMK2-201ENST00000331728 CABP4P57796 275 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 C11orf57Q6ZUT1 292 aaPredicted RBP10.16□□□□□ -0.78
LIMK2-201ENST00000331728 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 MRFAP1L1Q96HT8 127 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 USP28Q96RU2 1077 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 PAG1Q9NWQ8 432 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 ZNF215Q9UL58 517 aaPredicted RBP10.16□□□□□ -0.78
LIMK2-201ENST00000331728 CHD2O14647 1828 aaKnown RBP10.16□□□□□ -0.78
LIMK2-201ENST00000331728 CRYBG1Q9Y4K1 1723 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 LRRC37A3O60309 1634 aa10.16□□□□□ -0.78
LIMK2-201ENST00000331728 KBTBD3Q8NAB2 608 aa10.15□□□□□ -0.78
LIMK2-201ENST00000331728 MNS1Q8NEH6 495 aa10.15□□□□□ -0.78
LIMK2-201ENST00000331728 ERCC4Q92889 916 aaPredicted RBP10.15□□□□□ -0.78
LIMK2-201ENST00000331728 FTOQ9C0B1 505 aaKnown RBP eCLIP10.15□□□□□ -0.78
LIMK2-201ENST00000331728 MED23Q9ULK4 1368 aa10.15□□□□□ -0.78
LIMK2-201ENST00000331728 GOLGA8BA8MQT2 603 aa10.15□□□□□ -0.78
LIMK2-201ENST00000331728 PFKFB2O60825 505 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms