RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
LRRC28-202ENST00000331450 NFKBIEO00221 500 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 GRIPAP1Q4V328 841 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 TAF7LQ5H9L4 462 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 SIRT2Q8IXJ6 389 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 RPAP2Q8IXW5 612 aaPredicted RBP20■□□□□ 0.79
LRRC28-202ENST00000331450 MPHOSPH8Q99549 860 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 MINPP1Q9UNW1 487 aa20■□□□□ 0.79
LRRC28-202ENST00000331450 IRX6P78412 446 aaPredicted RBP19.99■□□□□ 0.79
LRRC28-202ENST00000331450 AAMPQ13685 434 aa19.99■□□□□ 0.79
LRRC28-202ENST00000331450 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
LRRC28-202ENST00000331450 PUS3Q9BZE2 481 aaKnown RBP19.99■□□□□ 0.79
LRRC28-202ENST00000331450 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
LRRC28-202ENST00000331450 FBXO3Q9UK99 471 aa19.99■□□□□ 0.79
LRRC28-202ENST00000331450 RIPOR2Q9Y4F9 1068 aa19.99■□□□□ 0.79
LRRC28-202ENST00000331450 GRIN3BO60391 1043 aa19.98■□□□□ 0.79
LRRC28-202ENST00000331450 GPSM2P81274 684 aa19.98■□□□□ 0.79
LRRC28-202ENST00000331450 LRRC24Q50LG9 513 aa19.98■□□□□ 0.79
LRRC28-202ENST00000331450 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
LRRC28-202ENST00000331450 RTFDC1Q9BY42 306 aaPredicted RBP19.98■□□□□ 0.79
LRRC28-202ENST00000331450 PA2G4Q9UQ80 394 aaKnown RBP19.98■□□□□ 0.79
LRRC28-202ENST00000331450 EYA2O00167 538 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 CIAO1O76071 339 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 ATG9AQ7Z3C6 839 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 PSMD1Q99460 953 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 CNNM1Q9NRU3 951 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 XDHP47989 1333 aa19.97■□□□□ 0.79
LRRC28-202ENST00000331450 FKBP4Q02790 459 aaKnown RBP eCLIP19.96■□□□□ 0.79
LRRC28-202ENST00000331450 CHRNDQ07001 517 aa19.96■□□□□ 0.79
LRRC28-202ENST00000331450 MPNDQ8N594 471 aa19.96■□□□□ 0.79
LRRC28-202ENST00000331450 COL4A5P29400 1685 aa19.96■□□□□ 0.79
LRRC28-202ENST00000331450 RASSF7Q02833 373 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 DPP8Q6V1X1 898 aaPredicted RBP19.95■□□□□ 0.78
LRRC28-202ENST00000331450 ARHGAP27Q6ZUM4 889 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 VGLL2Q8N8G2 317 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 SIL1Q9H173 461 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 TMX4Q9H1E5 349 aaPredicted RBP19.95■□□□□ 0.78
LRRC28-202ENST00000331450 TAOK3Q9H2K8 898 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 NSFL1CQ9UNZ2 370 aaKnown RBP19.95■□□□□ 0.78
LRRC28-202ENST00000331450 NOP58Q9Y2X3 529 aaKnown RBP19.95■□□□□ 0.78
LRRC28-202ENST00000331450 MROH5Q6ZUA9 1318 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 ZNF646O15015 1829 aaPredicted RBP19.95■□□□□ 0.78
LRRC28-202ENST00000331450 PSME4Q14997 1843 aa19.95■□□□□ 0.78
LRRC28-202ENST00000331450 PRELPP51888 382 aa19.94■□□□□ 0.78
LRRC28-202ENST00000331450 ANKRD2Q9GZV1 360 aa19.94■□□□□ 0.78
LRRC28-202ENST00000331450 HMMRO75330 724 aa19.93■□□□□ 0.78
LRRC28-202ENST00000331450 TBC1D16Q8TBP0 767 aa19.93■□□□□ 0.78
LRRC28-202ENST00000331450 POLLQ9UGP5 575 aa19.93■□□□□ 0.78
LRRC28-202ENST00000331450 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
LRRC28-202ENST00000331450 IL15P40933 162 aaPredicted RBP19.92■□□□□ 0.78
LRRC28-202ENST00000331450 SUPT20HQ8NEM7 779 aa19.92■□□□□ 0.78
LRRC28-202ENST00000331450 HELBQ8NG08 1087 aaPredicted RBP19.92■□□□□ 0.78
LRRC28-202ENST00000331450 ANKIB1Q9P2G1 1089 aa19.92■□□□□ 0.78
LRRC28-202ENST00000331450 IRS2Q9Y4H2 1338 aa19.92■□□□□ 0.78
LRRC28-202ENST00000331450 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
LRRC28-202ENST00000331450 TAF5LO75529 589 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 UFL1O94874 794 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 ATP2B4P23634 1241 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 GGA1Q9UJY5 639 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 LEMD3Q9Y2U8 911 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 MED23Q9ULK4 1368 aa19.91■□□□□ 0.78
LRRC28-202ENST00000331450 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
LRRC28-202ENST00000331450 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
LRRC28-202ENST00000331450 PDE8BO95263 885 aa19.9■□□□□ 0.78
LRRC28-202ENST00000331450 METTL24Q5JXM2 366 aa19.9■□□□□ 0.78
LRRC28-202ENST00000331450 VPS33BQ9H267 617 aa19.9■□□□□ 0.78
LRRC28-202ENST00000331450 ZNF804BA4D1E1 1349 aa19.9■□□□□ 0.78
LRRC28-202ENST00000331450 ZNF609O15014 1411 aa19.89■□□□□ 0.77
LRRC28-202ENST00000331450 SASH1O94885 1247 aa19.89■□□□□ 0.77
LRRC28-202ENST00000331450 LMNB1P20700 586 aa19.89■□□□□ 0.77
LRRC28-202ENST00000331450 IARSP41252 1262 aaKnown RBP19.89■□□□□ 0.77
LRRC28-202ENST00000331450 SCN9AQ15858 1988 aa19.89■□□□□ 0.77
LRRC28-202ENST00000331450 ZNF277Q9NRM2 450 aaPredicted RBP19.89■□□□□ 0.77
LRRC28-202ENST00000331450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.89■□□□□ 0.77
LRRC28-202ENST00000331450 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 SNAP23O00161 211 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 FGFR2P21802 821 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 KIAA2012Q0VF49 1180 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 G3BP1Q13283 466 aaKnown RBP eCLIP19.88■□□□□ 0.77
LRRC28-202ENST00000331450 UBE4AQ14139 1066 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 C15orf52Q6ZUT6 534 aaKnown RBP19.88■□□□□ 0.77
LRRC28-202ENST00000331450 GPR101Q96P66 508 aaPredicted RBP19.88■□□□□ 0.77
LRRC28-202ENST00000331450 EXOC6BQ9Y2D4 811 aa19.88■□□□□ 0.77
LRRC28-202ENST00000331450 HDAC1Q13547 482 aaPredicted RBP19.87■□□□□ 0.77
LRRC28-202ENST00000331450 AOC3Q16853 763 aa19.87■□□□□ 0.77
LRRC28-202ENST00000331450 EYA3Q99504 573 aa19.87■□□□□ 0.77
LRRC28-202ENST00000331450 CEP126Q9P2H0 1117 aa19.87■□□□□ 0.77
LRRC28-202ENST00000331450 PPIP5K2O43314 1243 aa19.86■□□□□ 0.77
LRRC28-202ENST00000331450 KLRK1P26718 216 aa19.86■□□□□ 0.77
LRRC28-202ENST00000331450 TFCP2Q12800 502 aa19.86■□□□□ 0.77
LRRC28-202ENST00000331450 PUM3Q15397 648 aaKnown RBP19.86■□□□□ 0.77
LRRC28-202ENST00000331450 WASHC4Q2M389 1173 aa19.86■□□□□ 0.77
LRRC28-202ENST00000331450 DCTPP1Q9H773 170 aa19.86■□□□□ 0.77
LRRC28-202ENST00000331450 KCNJ4P48050 445 aa19.85■□□□□ 0.77
LRRC28-202ENST00000331450 HSP90AB4PQ58FF6 505 aa19.85■□□□□ 0.77
LRRC28-202ENST00000331450 TXNRD3Q86VQ6 643 aa19.85■□□□□ 0.77
LRRC28-202ENST00000331450 OS9Q13438 667 aaPredicted RBP19.84■□□□□ 0.77
LRRC28-202ENST00000331450 C9orf131Q5VYM1 1079 aa19.84■□□□□ 0.77
LRRC28-202ENST00000331450 ERC1Q8IUD2 1116 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms