RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LTBP1Q14766 1721 aa34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 FAM161AQ3B820 660 aa34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 CIAPIN1Q6FI81 312 aa34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 CHADLQ6NUI6 762 aa34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 PNMA8AQ86V59 439 aaPredicted RBP34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 LDHDQ86WU2 507 aa34.96■■■■□ 3.19
ATPAF1-201ENST00000329231 TNIP1Q15025 636 aa34.95■■■■□ 3.19
ATPAF1-201ENST00000329231 ZC3H12CQ9C0D7 883 aaKnown RBP34.95■■■■□ 3.19
ATPAF1-201ENST00000329231 POTEIP0CG38 1075 aa34.94■■■■□ 3.18
ATPAF1-201ENST00000329231 POTEJP0CG39 1038 aa34.94■■■■□ 3.18
ATPAF1-201ENST00000329231 SCNN1DP51172 638 aa34.94■■■■□ 3.18
ATPAF1-201ENST00000329231 FOXO4P98177 505 aa34.94■■■■□ 3.18
ATPAF1-201ENST00000329231 EAPPQ56P03 285 aaPredicted RBP34.94■■■■□ 3.18
ATPAF1-201ENST00000329231 RAD17O75943 681 aa34.93■■■■□ 3.18
ATPAF1-201ENST00000329231 ATP2B4P23634 1241 aa34.93■■■■□ 3.18
ATPAF1-201ENST00000329231 MINPP1Q9UNW1 487 aa34.93■■■■□ 3.18
ATPAF1-201ENST00000329231 ANKRD18BA2A2Z9 1011 aa34.92■■■■□ 3.18
ATPAF1-201ENST00000329231 YDJCA8MPS7 323 aa34.92■■■■□ 3.18
ATPAF1-201ENST00000329231 GPR101Q96P66 508 aaPredicted RBP34.92■■■■□ 3.18
ATPAF1-201ENST00000329231 MPHOSPH8Q99549 860 aa34.92■■■■□ 3.18
ATPAF1-201ENST00000329231 DBNDD1Q9H9R9 158 aa34.92■■■■□ 3.18
ATPAF1-201ENST00000329231 HNRNPUQ00839 825 aaKnown RBP eCLIP34.91■■■■□ 3.18
ATPAF1-201ENST00000329231 IFIT5Q13325 482 aaKnown RBP34.9■■■■□ 3.18
ATPAF1-201ENST00000329231 CHMP3Q9Y3E7 222 aa34.9■■■■□ 3.18
ATPAF1-201ENST00000329231 G3V3G9 751 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 ECE2O60344 883 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 EPS15P42566 896 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 DOK7Q18PE1 504 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 DCAF8Q5TAQ9 597 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 CLEC11AQ9Y240 323 aa34.89■■■■□ 3.18
ATPAF1-201ENST00000329231 LMBR1LQ6UX01 489 aa34.88■■■■□ 3.17
ATPAF1-201ENST00000329231 GPRC5DQ9NZD1 345 aa34.88■■■■□ 3.17
ATPAF1-201ENST00000329231 GMPSP49915 693 aaPredicted RBP34.87■■■■□ 3.17
ATPAF1-201ENST00000329231 BRPF1P55201 1214 aaPredicted RBP34.87■■■■□ 3.17
ATPAF1-201ENST00000329231 EPHA10Q5JZY3 1008 aa34.87■■■■□ 3.17
ATPAF1-201ENST00000329231 UTYO14607 1347 aa34.86■■■■□ 3.17
ATPAF1-201ENST00000329231 ANKRD2Q9GZV1 360 aa34.86■■■■□ 3.17
ATPAF1-201ENST00000329231 NBPF7P0C2Y1 421 aaPredicted RBP34.85■■■■□ 3.17
ATPAF1-201ENST00000329231 CCT4P50991 539 aaKnown RBP34.85■■■■□ 3.17
ATPAF1-201ENST00000329231 RARSP54136 660 aaKnown RBP34.84■■■■□ 3.17
ATPAF1-201ENST00000329231 CCDC57Q2TAC2 916 aa34.84■■■■□ 3.17
ATPAF1-201ENST00000329231 USP50Q70EL3 339 aaPredicted RBP34.84■■■■□ 3.17
ATPAF1-201ENST00000329231 SPEF2Q9C093 1822 aa34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 PSMD14O00487 310 aa34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 SUCLG2Q96I99 432 aa34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 ADARB2Q9NS39 739 aaKnown RBP34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 NOB1Q9ULX3 412 aaKnown RBP34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 LEMD3Q9Y2U8 911 aa34.83■■■■□ 3.17
ATPAF1-201ENST00000329231 CEP350Q5VT06 3117 aa34.81■■■■□ 3.16
ATPAF1-201ENST00000329231 TAF7LQ5H9L4 462 aa34.81■■■■□ 3.16
ATPAF1-201ENST00000329231 API5Q9BZZ5 524 aaKnown RBP34.81■■■■□ 3.16
ATPAF1-201ENST00000329231 MED23Q9ULK4 1368 aa34.81■■■■□ 3.16
ATPAF1-201ENST00000329231 ADAMTSL1Q8N6G6 1762 aa34.8■■■■□ 3.16
ATPAF1-201ENST00000329231 DPF2Q92785 391 aa34.8■■■■□ 3.16
ATPAF1-201ENST00000329231 KCNQ5Q9NR82 932 aa34.8■■■■□ 3.16
ATPAF1-201ENST00000329231 HTRA3P83110 453 aa34.79■■■■□ 3.16
ATPAF1-201ENST00000329231 CHRNDQ07001 517 aa34.79■■■■□ 3.16
ATPAF1-201ENST00000329231 KAZALD1Q96I82 304 aa34.79■■■■□ 3.16
ATPAF1-201ENST00000329231 WTIPA6NIX2 430 aaPredicted RBP34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 RPS12P25398 132 aaKnown RBP34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 USP44Q9H0E7 712 aa34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 CNOT7Q9UIV1 285 aaKnown RBP34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 ZBTB12Q9Y330 459 aaPredicted RBP34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 ZNF804BA4D1E1 1349 aa34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 KIF16BQ96L93 1317 aa34.78■■■■□ 3.16
ATPAF1-201ENST00000329231 MAP1SQ66K74 1059 aaPredicted RBP34.77■■■■□ 3.16
ATPAF1-201ENST00000329231 PODNQ7Z5L7 613 aa34.77■■■■□ 3.16
ATPAF1-201ENST00000329231 CNTROBQ8N137 903 aa34.77■■■■□ 3.16
ATPAF1-201ENST00000329231 DNAJC5GQ8N7S2 189 aa34.77■■■■□ 3.16
ATPAF1-201ENST00000329231 H7C1D1 291 aa34.76■■■■□ 3.16
ATPAF1-201ENST00000329231 ITGBL1O95965 494 aaPredicted RBP34.76■■■■□ 3.16
ATPAF1-201ENST00000329231 KCNJ4P48050 445 aa34.76■■■■□ 3.16
ATPAF1-201ENST00000329231 LDHAL6AQ6ZMR3 332 aa34.76■■■■□ 3.16
ATPAF1-201ENST00000329231 BICC1Q9H694 974 aaKnown RBP34.76■■■■□ 3.16
ATPAF1-201ENST00000329231 PASKQ96RG2 1323 aa34.76■■■■□ 3.15
ATPAF1-201ENST00000329231 VIL1P09327 827 aaKnown RBP34.75■■■■□ 3.15
ATPAF1-201ENST00000329231 MICALL2Q8IY33 904 aa34.75■■■■□ 3.15
ATPAF1-201ENST00000329231 ZNF594Q96JF6 807 aaPredicted RBP34.75■■■■□ 3.15
ATPAF1-201ENST00000329231 RABL6Q3YEC7 729 aaPredicted RBP34.74■■■■□ 3.15
ATPAF1-201ENST00000329231 ARHGAP45Q92619 1136 aa34.74■■■■□ 3.15
ATPAF1-201ENST00000329231 CNNM1Q9NRU3 951 aa34.74■■■■□ 3.15
ATPAF1-201ENST00000329231 COA1Q9GZY4 146 aa34.72■■■■□ 3.15
ATPAF1-201ENST00000329231 ZBED9Q6R2W3 1325 aa34.72■■■■□ 3.15
ATPAF1-201ENST00000329231 CREBZFQ9NS37 354 aa34.71■■■■□ 3.15
ATPAF1-201ENST00000329231 USP17L3A6NCW0 530 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 USP17L4A6NCW7 530 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 TAF5LO75529 589 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 USP17L1Q7RTZ2 530 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 ANKRD44Q8N8A2 993 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 HELBQ8NG08 1087 aaPredicted RBP34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 KLRG1Q96E93 195 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 SCN9AQ15858 1988 aa34.7■■■■□ 3.15
ATPAF1-201ENST00000329231 SHTN1A0MZ66 631 aa34.69■■■■□ 3.14
ATPAF1-201ENST00000329231 IPO8O15397 1037 aaKnown RBP34.69■■■■□ 3.14
ATPAF1-201ENST00000329231 RSBN1LQ6PCB5 846 aaPredicted RBP34.69■■■■□ 3.14
ATPAF1-201ENST00000329231 TXNRD3Q86VQ6 643 aa34.69■■■■□ 3.14
ATPAF1-201ENST00000329231 AGBL3Q8NEM8 1001 aa34.68■■■■□ 3.14
ATPAF1-201ENST00000329231 TRPM4Q8TD43 1214 aa34.68■■■■□ 3.14
ATPAF1-201ENST00000329231 ZC3H15Q8WU90 426 aaKnown RBP34.68■■■■□ 3.14
ATPAF1-201ENST00000329231 ZNF609O15014 1411 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms