RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 AIMP1Q12904 312 aaKnown RBP12.08□□□□□ -0.48
SF3B2-201ENST00000322535 NAIF1Q69YI7 327 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-201ENST00000322535 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 TOM1O60784 492 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
SF3B2-201ENST00000322535 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 SMARCE1Q969G3 411 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-201ENST00000322535 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
SF3B2-201ENST00000322535 TRMT1Q9NXH9 659 aaKnown RBP12.07□□□□□ -0.48
SF3B2-201ENST00000322535 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 EXOC6BQ9Y2D4 811 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 PAXBP1Q9Y5B6 917 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 LTBP4Q8N2S1 1624 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 MYL6BP14649 208 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 NEK4P51957 841 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
SF3B2-201ENST00000322535 ANKRD65E5RJM6 399 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 DTNBO60941 627 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 KCNA4P22459 653 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 C1QTNF12Q5T7M4 302 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 ARMCX6Q7L4S7 300 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
SF3B2-201ENST00000322535 SLC24A3Q9HC58 644 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 C8orf37Q96NL8 207 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
SF3B2-201ENST00000322535 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
SF3B2-201ENST00000322535 TPM3P06753 285 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 FIBPO43427 364 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 IL2RBP14784 551 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 FLIIQ13045 1269 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
SF3B2-201ENST00000322535 MEIS3Q99687 375 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 IRAK4Q9NWZ3 460 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
SF3B2-201ENST00000322535 CPDO75976 1380 aa12.05□□□□□ -0.48
SF3B2-201ENST00000322535 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-201ENST00000322535 CABP4P57796 275 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-201ENST00000322535 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-201ENST00000322535 COL18A1P39060 1754 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 MAGEA9P43362 315 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 GORABQ5T7V8 394 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-201ENST00000322535 KIF3CO14782 793 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 CCDC30Q5VVM6 783 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
SF3B2-201ENST00000322535 MX1P20591 662 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 PLA2G4AP47712 749 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 FAXDC2Q96IV6 333 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 LMAN1P49257 510 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 MTA1Q13330 715 aa12.03□□□□□ -0.48
SF3B2-201ENST00000322535 BRD1O95696 1058 aa12.02□□□□□ -0.48
SF3B2-201ENST00000322535 PNMA6AP0CW24 399 aaPredicted RBP12.02□□□□□ -0.48
SF3B2-201ENST00000322535 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.48
SF3B2-201ENST00000322535 PTPN14Q15678 1187 aa12.02□□□□□ -0.48
SF3B2-201ENST00000322535 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.48
SF3B2-201ENST00000322535 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
SF3B2-201ENST00000322535 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
SF3B2-201ENST00000322535 CAMK4Q16566 473 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
SF3B2-201ENST00000322535 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.49
SF3B2-201ENST00000322535 PTPRCP08575 1304 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
SF3B2-201ENST00000322535 CCDC196A0A1B0GTZ2 297 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 GPS2Q13227 327 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 ZSCAN25Q6NSZ9 544 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 API5Q9BZZ5 524 aaKnown RBP12.01□□□□□ -0.49
SF3B2-201ENST00000322535 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-201ENST00000322535 CLCN6P51797 869 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 TRDNQ13061 729 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 NOM1Q5C9Z4 860 aaKnown RBP12.01□□□□□ -0.49
SF3B2-201ENST00000322535 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 ANKRD23Q86SG2 305 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms