RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 GLTPD2A6NH11 291 aa11.99□□□□□ -0.49
KARS-202ENST00000319410 DDX58O95786 925 aaKnown RBP11.99□□□□□ -0.49
KARS-202ENST00000319410 HTRA3P83110 453 aa11.99□□□□□ -0.49
KARS-202ENST00000319410 CRY2Q49AN0 593 aa11.99□□□□□ -0.49
KARS-202ENST00000319410 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
KARS-202ENST00000319410 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
KARS-202ENST00000319410 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
KARS-202ENST00000319410 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
KARS-202ENST00000319410 PCNTO95613 3336 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 CCDC66A2RUB6 948 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
KARS-202ENST00000319410 KCNJ4P48050 445 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
KARS-202ENST00000319410 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
KARS-202ENST00000319410 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 DDNO94850 711 aaPredicted RBP11.97□□□□□ -0.49
KARS-202ENST00000319410 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 TMED8Q6PL24 325 aaPredicted RBP11.97□□□□□ -0.49
KARS-202ENST00000319410 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
KARS-202ENST00000319410 POTECB2RU33 542 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 SOGA3Q5TF21 947 aa11.97□□□□□ -0.49
KARS-202ENST00000319410 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.49
KARS-202ENST00000319410 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
KARS-202ENST00000319410 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
KARS-202ENST00000319410 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
KARS-202ENST00000319410 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
KARS-202ENST00000319410 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.49
KARS-202ENST00000319410 TRMT112Q9UI30 125 aaKnown RBP11.96□□□□□ -0.49
KARS-202ENST00000319410 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.5
KARS-202ENST00000319410 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.5
KARS-202ENST00000319410 CBX1P83916 185 aa11.96□□□□□ -0.5
KARS-202ENST00000319410 HS1BP3Q53T59 392 aa11.96□□□□□ -0.5
KARS-202ENST00000319410 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.5
KARS-202ENST00000319410 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.5
KARS-202ENST00000319410 FLIIQ13045 1269 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
KARS-202ENST00000319410 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
KARS-202ENST00000319410 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
KARS-202ENST00000319410 RTKN2Q8IZC4 609 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
KARS-202ENST00000319410 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
KARS-202ENST00000319410 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
KARS-202ENST00000319410 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 SSH1Q8WYL5 1049 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 FAM89AQ96GI7 184 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 ISCA1Q9BUE6 129 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
KARS-202ENST00000319410 PTPRCP08575 1304 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
KARS-202ENST00000319410 ZNF771Q7L3S4 317 aaPredicted RBP11.94□□□□□ -0.5
KARS-202ENST00000319410 G2E3Q7L622 706 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 TIGD1Q96MW7 591 aa11.94□□□□□ -0.5
KARS-202ENST00000319410 TAF1P21675 1872 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 ABCC4O15439 1325 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
KARS-202ENST00000319410 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
KARS-202ENST00000319410 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 LAMB2P55268 1798 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 COL4A5P29400 1685 aa11.93□□□□□ -0.5
KARS-202ENST00000319410 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 PI4KAP2A4QPH2 592 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 APLP1P51693 650 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 PI4KAP1Q8N8J0 262 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 SMC1BQ8NDV3 1235 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 ARHGAP45Q92619 1136 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
KARS-202ENST00000319410 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
KARS-202ENST00000319410 FSTL1Q12841 308 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
KARS-202ENST00000319410 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 TRAK2O60296 914 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 NEXNQ0ZGT2 675 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 MYD88Q99836 296 aa11.91□□□□□ -0.5
KARS-202ENST00000319410 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
KARS-202ENST00000319410 KIF16BQ96L93 1317 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 MCM4P33991 863 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 EGFL6Q8IUX8 553 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1220.2 ms