RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 TPD52L1Q16890 204 aaPredicted RBP17.56■□□□□ 0.4
TFE3-201ENST00000315869 FILIP1Q7Z7B0 1213 aa17.56■□□□□ 0.4
TFE3-201ENST00000315869 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
TFE3-201ENST00000315869 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
TFE3-201ENST00000315869 TPM3P06753 285 aa17.55■□□□□ 0.4
TFE3-201ENST00000315869 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
TFE3-201ENST00000315869 CCDC94Q9BW85 323 aaPredicted RBP17.55■□□□□ 0.4
TFE3-201ENST00000315869 STRCQ7RTU9 1775 aa17.55■□□□□ 0.4
TFE3-201ENST00000315869 PDIA6Q15084 440 aa17.55■□□□□ 0.4
TFE3-201ENST00000315869 ZRSR1Q15695 479 aaKnown RBP17.55■□□□□ 0.4
TFE3-201ENST00000315869 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
TFE3-201ENST00000315869 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
TFE3-201ENST00000315869 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 IGSF3O75054 1194 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 TFCP2Q12800 502 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 EPHA10Q5JZY3 1008 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 DDX19AQ9NUU7 478 aaKnown RBP17.54■□□□□ 0.4
TFE3-201ENST00000315869 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
TFE3-201ENST00000315869 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
TFE3-201ENST00000315869 ALS2Q96Q42 1657 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 MTX1Q13505 466 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 DCCP43146 1447 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 TOB2Q14106 344 aaPredicted RBP17.53■□□□□ 0.4
TFE3-201ENST00000315869 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
TFE3-201ENST00000315869 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 TNNT1P13805 278 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 IL2RBP14784 551 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 CCDC73Q6ZRK6 1079 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 FMNL2Q96PY5 1086 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
TFE3-201ENST00000315869 ME1P48163 572 aa17.52■□□□□ 0.4
TFE3-201ENST00000315869 ZNF710Q8N1W2 664 aa17.52■□□□□ 0.4
TFE3-201ENST00000315869 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
TFE3-201ENST00000315869 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
TFE3-201ENST00000315869 NPHP1O15259 732 aa17.52■□□□□ 0.39
TFE3-201ENST00000315869 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.39
TFE3-201ENST00000315869 TAF5LO75529 589 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
TFE3-201ENST00000315869 NCOA5Q9HCD5 579 aaKnown RBP17.51■□□□□ 0.39
TFE3-201ENST00000315869 USP42Q9H9J4 1324 aaKnown RBP17.51■□□□□ 0.39
TFE3-201ENST00000315869 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 A0A087WZG4 1122 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 GOLIM4O00461 696 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
TFE3-201ENST00000315869 TTLL7Q6ZT98 887 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
TFE3-201ENST00000315869 U2AF2P26368 475 aaKnown RBP eCLIP17.5■□□□□ 0.391e-7■■□□□ 13.8
TFE3-201ENST00000315869 APOBRQ0VD83 1088 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 KRT32Q14532 448 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 PGBD1Q96JS3 809 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 DBNLQ9UJU6 430 aaKnown RBP17.5■□□□□ 0.39
TFE3-201ENST00000315869 XIRP1Q702N8 1843 aaKnown RBP17.5■□□□□ 0.39
TFE3-201ENST00000315869 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
TFE3-201ENST00000315869 ANKRD13DQ6ZTN6 518 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 CLSTN2Q9H4D0 955 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 CCAR1Q8IX12 1150 aaKnown RBP17.5■□□□□ 0.39
TFE3-201ENST00000315869 HMG20BQ9P0W2 317 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
TFE3-201ENST00000315869 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
TFE3-201ENST00000315869 ZNF75DP51815 510 aa17.49■□□□□ 0.39
TFE3-201ENST00000315869 GCKRQ14397 625 aa17.49■□□□□ 0.39
TFE3-201ENST00000315869 CFAP45Q9UL16 551 aa17.49■□□□□ 0.39
TFE3-201ENST00000315869 FAM208AQ9UK61 1670 aaKnown RBP17.49■□□□□ 0.39
TFE3-201ENST00000315869 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
TFE3-201ENST00000315869 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.39
TFE3-201ENST00000315869 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
TFE3-201ENST00000315869 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
TFE3-201ENST00000315869 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
TFE3-201ENST00000315869 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
TFE3-201ENST00000315869 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
TFE3-201ENST00000315869 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
TFE3-201ENST00000315869 CYP21A2P08686 494 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 TIMM10P62072 90 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 NAA30Q147X3 362 aaPredicted RBP17.47■□□□□ 0.39
TFE3-201ENST00000315869 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
TFE3-201ENST00000315869 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
TFE3-201ENST00000315869 ATP2B3Q16720 1220 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
TFE3-201ENST00000315869 HAND2P61296 217 aa17.46■□□□□ 0.39
TFE3-201ENST00000315869 MCMDC2Q4G0Z9 681 aa17.46■□□□□ 0.39
TFE3-201ENST00000315869 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
TFE3-201ENST00000315869 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
TFE3-201ENST00000315869 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
TFE3-201ENST00000315869 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
TFE3-201ENST00000315869 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms