RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 ATP5JP18859 108 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 SSFA2P28290 1259 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 PDE8BO95263 885 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 NUP98P52948 1817 aa13.43□□□□□ -0.26
TRIM59-201ENST00000309784 IDH1O75874 414 aaKnown RBP13.42□□□□□ -0.26
TRIM59-201ENST00000309784 SERPINB2P05120 415 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
TRIM59-201ENST00000309784 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
TRIM59-201ENST00000309784 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 RGS17Q9UGC6 210 aaPredicted RBP13.42□□□□□ -0.26
TRIM59-201ENST00000309784 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
TRIM59-201ENST00000309784 CHRNDQ07001 517 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
TRIM59-201ENST00000309784 PROM2Q8N271 834 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
TRIM59-201ENST00000309784 GYS1P13807 737 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 NBR1Q14596 966 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
TRIM59-201ENST00000309784 PI16Q6UXB8 463 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 STK32BQ9NY57 414 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 NHSQ6T4R5 1651 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
TRIM59-201ENST00000309784 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
TRIM59-201ENST00000309784 LPIN2Q92539 896 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 ST18O60284 1047 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 BAG6P46379 1132 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 PLSCR1O15162 318 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
TRIM59-201ENST00000309784 SGSM2O43147 1006 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 ZAP70P43403 619 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
TRIM59-201ENST00000309784 NEK4P51957 841 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 TMX4Q9H1E5 349 aaPredicted RBP13.39□□□□□ -0.27
TRIM59-201ENST00000309784 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 PHKA1P46020 1223 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 HAUS7Q99871 368 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 ANTXR1Q9H6X2 564 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
TRIM59-201ENST00000309784 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
TRIM59-201ENST00000309784 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
TRIM59-201ENST00000309784 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
TRIM59-201ENST00000309784 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 RABEP1Q15276 862 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
TRIM59-201ENST00000309784 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
TRIM59-201ENST00000309784 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRIM59-201ENST00000309784 IL25Q9H293 177 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 BCAMP50895 628 aa13.38□□□□□ -0.27
TRIM59-201ENST00000309784 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
TRIM59-201ENST00000309784 CHGBP05060 677 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 APPP05067 770 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 MMP10P09238 476 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 CHAF1AQ13111 956 aaPredicted RBP13.37□□□□□ -0.27
TRIM59-201ENST00000309784 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
TRIM59-201ENST00000309784 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
TRIM59-201ENST00000309784 ZNF609O15014 1411 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 UQCRFS1P1P0C7P4 283 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
TRIM59-201ENST00000309784 GYG1P46976 350 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 FGD1P98174 961 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 SCARF1Q14162 830 aa13.37□□□□□ -0.27
TRIM59-201ENST00000309784 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.276e-12■□□□□ 9.4
TRIM59-201ENST00000309784 JAG2Q9Y219 1238 aa13.36□□□□□ -0.27
TRIM59-201ENST00000309784 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
TRIM59-201ENST00000309784 BSDC1Q9NW68 430 aaPredicted RBP13.36□□□□□ -0.27
TRIM59-201ENST00000309784 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 MINPP1Q9UNW1 487 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 G3V3G9 751 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 MCMDC2Q4G0Z9 681 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 MCAMP43121 646 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 PTH1RQ03431 593 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
TRIM59-201ENST00000309784 RBM17Q96I25 401 aaKnown RBP13.35□□□□□ -0.27
TRIM59-201ENST00000309784 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms