RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 CIAO1O76071 339 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 KIAA1211Q6ZU35 1233 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 COL4A1P02462 1669 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
CDH16-201ENST00000299752 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
CDH16-201ENST00000299752 ST18O60284 1047 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 MPHOSPH8Q99549 860 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
CDH16-201ENST00000299752 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
CDH16-201ENST00000299752 NFIXQ14938 502 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 DDX60Q8IY21 1712 aaKnown RBP17.12■□□□□ 0.33
CDH16-201ENST00000299752 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 NEK4P51957 841 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 CCDC152Q4G0S7 254 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 XAGE2Q96GT9 111 aa17.12■□□□□ 0.33
CDH16-201ENST00000299752 RAD50Q92878 1312 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 RIC1Q4ADV7 1423 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 HSPA4P34932 840 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 ANAPC15P60006 121 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
CDH16-201ENST00000299752 CHMP5Q9NZZ3 219 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 ZNF609O15014 1411 aa17.11■□□□□ 0.33
CDH16-201ENST00000299752 GOLIM4O00461 696 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 HIP1O00291 1037 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
CDH16-201ENST00000299752 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDH16-201ENST00000299752 SCARF1Q14162 830 aa17.1■□□□□ 0.33
CDH16-201ENST00000299752 GYS1P13807 737 aa17.09■□□□□ 0.33
CDH16-201ENST00000299752 PTH1RQ03431 593 aa17.09■□□□□ 0.33
CDH16-201ENST00000299752 HAUS7Q99871 368 aa17.09■□□□□ 0.33
CDH16-201ENST00000299752 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
CDH16-201ENST00000299752 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
CDH16-201ENST00000299752 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
CDH16-201ENST00000299752 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.33
CDH16-201ENST00000299752 DDIT3P35638 169 aa17.08■□□□□ 0.33
CDH16-201ENST00000299752 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.33
CDH16-201ENST00000299752 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.33
CDH16-201ENST00000299752 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.33
CDH16-201ENST00000299752 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
CDH16-201ENST00000299752 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
CDH16-201ENST00000299752 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
CDH16-201ENST00000299752 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.32
CDH16-201ENST00000299752 PDE8BO95263 885 aa17.07■□□□□ 0.32
CDH16-201ENST00000299752 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
CDH16-201ENST00000299752 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
CDH16-201ENST00000299752 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
CDH16-201ENST00000299752 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
CDH16-201ENST00000299752 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
CDH16-201ENST00000299752 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
CDH16-201ENST00000299752 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
CDH16-201ENST00000299752 NYXQ9GZU5 481 aa17.06■□□□□ 0.32
CDH16-201ENST00000299752 IQSEC3Q9UPP2 1182 aaPredicted RBP17.06■□□□□ 0.32
CDH16-201ENST00000299752 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
CDH16-201ENST00000299752 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
CDH16-201ENST00000299752 PHKA1P46020 1223 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
CDH16-201ENST00000299752 PAG1Q9NWQ8 432 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 CHRNDQ07001 517 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
CDH16-201ENST00000299752 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
CDH16-201ENST00000299752 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
CDH16-201ENST00000299752 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
CDH16-201ENST00000299752 PLSCR1O15162 318 aa17.04■□□□□ 0.32
CDH16-201ENST00000299752 SSFA2P28290 1259 aa17.04■□□□□ 0.32
CDH16-201ENST00000299752 ZAP70P43403 619 aa17.04■□□□□ 0.32
CDH16-201ENST00000299752 KCNJ4P48050 445 aa17.04■□□□□ 0.32
CDH16-201ENST00000299752 CASZ1Q86V15 1759 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 SERPINB2P05120 415 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 DDR1Q08345 913 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 PRR5LQ6MZQ0 368 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
CDH16-201ENST00000299752 CARMIL3Q8ND23 1372 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 ADRA2BP18089 450 aa17.03■□□□□ 0.32
CDH16-201ENST00000299752 RBM8AQ9Y5S9 174 aaKnown RBP17.03■□□□□ 0.32
CDH16-201ENST00000299752 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
CDH16-201ENST00000299752 MCAMP43121 646 aa17.02■□□□□ 0.32
CDH16-201ENST00000299752 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
CDH16-201ENST00000299752 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
CDH16-201ENST00000299752 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
CDH16-201ENST00000299752 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.32
CDH16-201ENST00000299752 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
CDH16-201ENST00000299752 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms