RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SAGE1Q9NXZ1 904 aa26.88■■□□□ 1.89
SMCO4-201ENST00000298966 DUOX1Q9NRD9 1551 aa26.88■■□□□ 1.89
SMCO4-201ENST00000298966 TNRC18O15417 2968 aaPredicted RBP26.88■■□□□ 1.89
SMCO4-201ENST00000298966 AIMP1Q12904 312 aaKnown RBP26.87■■□□□ 1.89
SMCO4-201ENST00000298966 TBC1D10BQ4KMP7 808 aaPredicted RBP26.87■■□□□ 1.89
SMCO4-201ENST00000298966 DLK2Q6UY11 383 aa26.87■■□□□ 1.89
SMCO4-201ENST00000298966 COPS6Q7L5N1 327 aa26.87■■□□□ 1.89
SMCO4-201ENST00000298966 RCAN3Q9UKA8 241 aa26.87■■□□□ 1.89
SMCO4-201ENST00000298966 LRRC37AA6NMS7 1700 aa26.87■■□□□ 1.89
SMCO4-201ENST00000298966 AKAP11Q9UKA4 1901 aa26.86■■□□□ 1.89
SMCO4-201ENST00000298966 PSMD14O00487 310 aa26.86■■□□□ 1.89
SMCO4-201ENST00000298966 TCIRG1Q13488 830 aa26.86■■□□□ 1.89
SMCO4-201ENST00000298966 WASHC4Q2M389 1173 aa26.86■■□□□ 1.89
SMCO4-201ENST00000298966 DCPSQ96C86 337 aaKnown RBP26.86■■□□□ 1.89
SMCO4-201ENST00000298966 SPINK5Q9NQ38 1064 aaPredicted RBP26.86■■□□□ 1.89
SMCO4-201ENST00000298966 FAM155AB1AL88 458 aaPredicted RBP26.85■■□□□ 1.89
SMCO4-201ENST00000298966 KIF23Q02241 960 aaPredicted RBP26.85■■□□□ 1.89
SMCO4-201ENST00000298966 XAGE3Q8WTP9 111 aa26.85■■□□□ 1.89
SMCO4-201ENST00000298966 ZNF157P51786 506 aaPredicted RBP26.84■■□□□ 1.89
SMCO4-201ENST00000298966 DBNDD1Q9H9R9 158 aa26.84■■□□□ 1.89
SMCO4-201ENST00000298966 RPS12P25398 132 aaKnown RBP26.83■■□□□ 1.89
SMCO4-201ENST00000298966 NSFL1CQ9UNZ2 370 aaKnown RBP26.83■■□□□ 1.89
SMCO4-201ENST00000298966 RIMBP2O15034 1052 aa26.82■■□□□ 1.88
SMCO4-201ENST00000298966 SOX10P56693 466 aa26.82■■□□□ 1.88
SMCO4-201ENST00000298966 RBM26Q5T8P6 1007 aaKnown RBP26.82■■□□□ 1.88
SMCO4-201ENST00000298966 NECTIN2Q92692 538 aa26.82■■□□□ 1.88
SMCO4-201ENST00000298966 BABAM1Q9NWV8 329 aa26.82■■□□□ 1.88
SMCO4-201ENST00000298966 FANCIQ9NVI1 1328 aa26.82■■□□□ 1.88
SMCO4-201ENST00000298966 ADM5C9JUS6 153 aa26.81■■□□□ 1.88
SMCO4-201ENST00000298966 C6orf229H3BNL8 230 aa26.81■■□□□ 1.88
SMCO4-201ENST00000298966 TRPA1O75762 1119 aa26.81■■□□□ 1.88
SMCO4-201ENST00000298966 ZNF853P0CG23 659 aa26.81■■□□□ 1.88
SMCO4-201ENST00000298966 RNF186Q9NXI6 227 aa26.81■■□□□ 1.88
SMCO4-201ENST00000298966 DDX60Q8IY21 1712 aaKnown RBP26.8■■□□□ 1.88
SMCO4-201ENST00000298966 EGFRP00533 1210 aa26.8■■□□□ 1.88
SMCO4-201ENST00000298966 EYA3Q99504 573 aa26.8■■□□□ 1.88
SMCO4-201ENST00000298966 ZNF428Q96B54 188 aa26.79■■□□□ 1.88
SMCO4-201ENST00000298966 ECE2O60344 883 aa26.78■■□□□ 1.88
SMCO4-201ENST00000298966 SULF1Q8IWU6 871 aa26.78■■□□□ 1.88
SMCO4-201ENST00000298966 CELF1Q92879 486 aaKnown RBP26.78■■□□□ 1.88
SMCO4-201ENST00000298966 SLC10A3P09131 477 aa26.77■■□□□ 1.88
SMCO4-201ENST00000298966 KIF4BQ2VIQ3 1234 aa26.77■■□□□ 1.88
SMCO4-201ENST00000298966 ERICH6BQ5W0A0 696 aa26.77■■□□□ 1.88
SMCO4-201ENST00000298966 POLLQ9UGP5 575 aa26.77■■□□□ 1.88
SMCO4-201ENST00000298966 GPSM2P81274 684 aa26.76■■□□□ 1.87
SMCO4-201ENST00000298966 SF3B3Q15393 1217 aaKnown RBP26.76■■□□□ 1.87
SMCO4-201ENST00000298966 DOK7Q18PE1 504 aa26.76■■□□□ 1.87
SMCO4-201ENST00000298966 RTL9Q8NET4 1388 aa26.75■■□□□ 1.87
SMCO4-201ENST00000298966 CTU1Q7Z7A3 348 aaKnown RBP26.75■■□□□ 1.87
SMCO4-201ENST00000298966 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.75■■□□□ 1.87
SMCO4-201ENST00000298966 CSRNP1Q96S65 589 aa26.75■■□□□ 1.87
SMCO4-201ENST00000298966 KCNQ5Q9NR82 932 aa26.75■■□□□ 1.87
SMCO4-201ENST00000298966 GGA3Q9NZ52 723 aa26.75■■□□□ 1.87
SMCO4-201ENST00000298966 CHL1O00533 1208 aa26.74■■□□□ 1.87
SMCO4-201ENST00000298966 REM2Q8IYK8 340 aaPredicted RBP26.74■■□□□ 1.87
SMCO4-201ENST00000298966 CDCA5Q96FF9 252 aa26.73■■□□□ 1.87
SMCO4-201ENST00000298966 FAM89AQ96GI7 184 aa26.73■■□□□ 1.87
SMCO4-201ENST00000298966 G3V3G9 751 aa26.72■■□□□ 1.87
SMCO4-201ENST00000298966 DCAF8Q5TAQ9 597 aa26.72■■□□□ 1.87
SMCO4-201ENST00000298966 PLBD2Q8NHP8 589 aa26.72■■□□□ 1.87
SMCO4-201ENST00000298966 TBC1D16Q8TBP0 767 aa26.72■■□□□ 1.87
SMCO4-201ENST00000298966 ZC3H12CQ9C0D7 883 aaKnown RBP26.72■■□□□ 1.87
SMCO4-201ENST00000298966 SCN9AQ15858 1988 aa26.71■■□□□ 1.87
SMCO4-201ENST00000298966 VIL1P09327 827 aaKnown RBP26.71■■□□□ 1.87
SMCO4-201ENST00000298966 TSR2Q969E8 191 aaKnown RBP26.71■■□□□ 1.87
SMCO4-201ENST00000298966 ISCA1Q9BUE6 129 aa26.71■■□□□ 1.87
SMCO4-201ENST00000298966 CHPF2Q9P2E5 772 aa26.71■■□□□ 1.87
SMCO4-201ENST00000298966 RRP1P56182 461 aaKnown RBP26.7■■□□□ 1.86
SMCO4-201ENST00000298966 PRPF38BQ5VTL8 546 aaKnown RBP26.7■■□□□ 1.86
SMCO4-201ENST00000298966 ANKRD13DQ6ZTN6 518 aa26.7■■□□□ 1.86
SMCO4-201ENST00000298966 MBIPQ9NS73 344 aa26.7■■□□□ 1.86
SMCO4-201ENST00000298966 LAS1LQ9Y4W2 734 aaKnown RBP26.7■■□□□ 1.86
SMCO4-201ENST00000298966 ATP5J2-PTCD1G3V325 749 aa26.69■■□□□ 1.86
SMCO4-201ENST00000298966 RPS8P62241 208 aaKnown RBP26.69■■□□□ 1.86
SMCO4-201ENST00000298966 EXOSC9Q06265 439 aaKnown RBP26.69■■□□□ 1.86
SMCO4-201ENST00000298966 RASAL3Q86YV0 1011 aa26.69■■□□□ 1.86
SMCO4-201ENST00000298966 ASTN2O75129 1339 aaPredicted RBP26.68■■□□□ 1.86
SMCO4-201ENST00000298966 RTL5Q5HYW3 569 aaPredicted RBP26.68■■□□□ 1.86
SMCO4-201ENST00000298966 COL4A1P02462 1669 aa26.67■■□□□ 1.86
SMCO4-201ENST00000298966 FKBP1BP68106 108 aa26.67■■□□□ 1.86
SMCO4-201ENST00000298966 KRT24Q2M2I5 525 aa26.67■■□□□ 1.86
SMCO4-201ENST00000298966 ANGEL2Q5VTE6 544 aaKnown RBP26.67■■□□□ 1.86
SMCO4-201ENST00000298966 IRS4O14654 1257 aaPredicted RBP26.66■■□□□ 1.86
SMCO4-201ENST00000298966 UFL1O94874 794 aa26.66■■□□□ 1.86
SMCO4-201ENST00000298966 SCARF1Q14162 830 aa26.66■■□□□ 1.86
SMCO4-201ENST00000298966 HDGFL1Q5TGJ6 251 aa26.66■■□□□ 1.86
SMCO4-201ENST00000298966 PODXL2Q9NZ53 605 aa26.66■■□□□ 1.86
SMCO4-201ENST00000298966 PAPPA2Q9BXP8 1791 aa26.66■■□□□ 1.86
SMCO4-201ENST00000298966 ZNF280AP59817 542 aaPredicted RBP26.65■■□□□ 1.86
SMCO4-201ENST00000298966 ALDH1L2Q3SY69 923 aa26.65■■□□□ 1.86
SMCO4-201ENST00000298966 AGBL3Q8NEM8 1001 aa26.65■■□□□ 1.86
SMCO4-201ENST00000298966 ANKIB1Q9P2G1 1089 aa26.65■■□□□ 1.86
SMCO4-201ENST00000298966 DBF4Q9UBU7 674 aaPredicted RBP26.65■■□□□ 1.86
SMCO4-201ENST00000298966 HDAC9Q9UKV0 1011 aa26.65■■□□□ 1.86
SMCO4-201ENST00000298966 HPS5Q9UPZ3 1129 aa26.65■■□□□ 1.86
SMCO4-201ENST00000298966 RARSP54136 660 aaKnown RBP26.64■■□□□ 1.86
SMCO4-201ENST00000298966 PKN2Q16513 984 aaKnown RBP26.64■■□□□ 1.86
SMCO4-201ENST00000298966 RSBN1LQ6PCB5 846 aaPredicted RBP26.64■■□□□ 1.86
SMCO4-201ENST00000298966 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
SMCO4-201ENST00000298966 GGA1Q9UJY5 639 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms