RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 TAF5LO75529 589 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 PTPN21Q16825 1174 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 ANKLE2Q86XL3 938 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
KDM1B-201ENST00000297792 PXDNQ92626 1479 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 A0A0G2JLW4 131 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 NALCNQ8IZF0 1738 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 CYP21A2P08686 494 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 DMTNQ08495 405 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 SCRN1Q12765 414 aa16.85■□□□□ 0.29
KDM1B-201ENST00000297792 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
KDM1B-201ENST00000297792 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 A0A087WZG4 1122 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 ERICH4A6NGS2 130 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
KDM1B-201ENST00000297792 TIMM10P62072 90 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 WASHC4Q2M389 1173 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
KDM1B-201ENST00000297792 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.29
KDM1B-201ENST00000297792 IGKV5-2P06315 115 aa16.83■□□□□ 0.28
KDM1B-201ENST00000297792 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
KDM1B-201ENST00000297792 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
KDM1B-201ENST00000297792 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.28
KDM1B-201ENST00000297792 KRT32Q14532 448 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 STK38Q15208 465 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
KDM1B-201ENST00000297792 GJB4Q9NTQ9 266 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
KDM1B-201ENST00000297792 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 STX1AQ16623 288 aa16.82■□□□□ 0.28
KDM1B-201ENST00000297792 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 TTLL5Q6EMB2 1281 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 GOLPH3LQ9H4A5 285 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 CGNQ9P2M7 1197 aaKnown RBP16.81■□□□□ 0.28
KDM1B-201ENST00000297792 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 GNL2Q13823 731 aaKnown RBP16.81■□□□□ 0.28
KDM1B-201ENST00000297792 CEP57L1Q8IYX8 460 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 XRN1Q8IZH2 1706 aaKnown RBP16.81■□□□□ 0.28
KDM1B-201ENST00000297792 RESTQ13127 1097 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 ELF2Q15723 593 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 TMC6Q7Z403 805 aa16.81■□□□□ 0.28
KDM1B-201ENST00000297792 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
KDM1B-201ENST00000297792 ELP1O95163 1332 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 CPLX1O14810 134 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 GCKRQ14397 625 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 LRRC8AQ8IWT6 810 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
KDM1B-201ENST00000297792 NEURL1BA8MQ27 555 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 MTX1Q13505 466 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
KDM1B-201ENST00000297792 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
KDM1B-201ENST00000297792 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 IL17RAQ96F46 866 aa16.79■□□□□ 0.28
KDM1B-201ENST00000297792 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 PLA2G4DQ86XP0 818 aa16.79■□□□□ 0.28
KDM1B-201ENST00000297792 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 HOXB7P09629 217 aa16.79■□□□□ 0.28
KDM1B-201ENST00000297792 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
KDM1B-201ENST00000297792 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
KDM1B-201ENST00000297792 LMOD1P29536 600 aaPredicted RBP16.78■□□□□ 0.28
KDM1B-201ENST00000297792 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
KDM1B-201ENST00000297792 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
KDM1B-201ENST00000297792 RXRAP19793 462 aa16.78■□□□□ 0.28
KDM1B-201ENST00000297792 MARCKSP29966 332 aaPredicted RBP16.78■□□□□ 0.28
KDM1B-201ENST00000297792 ANO10Q9NW15 660 aa16.78■□□□□ 0.28
KDM1B-201ENST00000297792 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
KDM1B-201ENST00000297792 ZNF790Q6PG37 636 aa16.77■□□□□ 0.28
KDM1B-201ENST00000297792 TRERF1Q96PN7 1200 aa16.77■□□□□ 0.28
KDM1B-201ENST00000297792 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
KDM1B-201ENST00000297792 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
KDM1B-201ENST00000297792 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.27
KDM1B-201ENST00000297792 PDIA6Q15084 440 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 SYT10Q6XYQ8 523 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
KDM1B-201ENST00000297792 NSUN7Q8NE18 718 aaKnown RBP16.76■□□□□ 0.27
KDM1B-201ENST00000297792 ARHGAP23Q9P227 1491 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 APPP05067 770 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 KIF18AQ8NI77 898 aa16.76■□□□□ 0.27
KDM1B-201ENST00000297792 NAT10Q9H0A0 1025 aaKnown RBP16.76■□□□□ 0.27
KDM1B-201ENST00000297792 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms