RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 GGA1Q9UJY5 639 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 WDR33Q9C0J8 1336 aaKnown RBP22.25■■□□□ 1.15
TFF3-201ENST00000291525 TRAF5O00463 557 aa22.24■■□□□ 1.15
TFF3-201ENST00000291525 PSMD14O00487 310 aa22.24■■□□□ 1.15
TFF3-201ENST00000291525 UFL1O94874 794 aa22.24■■□□□ 1.15
TFF3-201ENST00000291525 CTCFP49711 727 aaPredicted RBP22.24■■□□□ 1.15
TFF3-201ENST00000291525 PAXIP1Q6ZW49 1069 aaPredicted RBP22.24■■□□□ 1.15
TFF3-201ENST00000291525 CDC5LQ99459 802 aaKnown RBP22.24■■□□□ 1.15
TFF3-201ENST00000291525 FOXN1O15353 648 aa22.23■■□□□ 1.15
TFF3-201ENST00000291525 CTSWP56202 376 aa22.23■■□□□ 1.15
TFF3-201ENST00000291525 MAP2K1Q02750 393 aaPredicted RBP22.23■■□□□ 1.15
TFF3-201ENST00000291525 JARID2Q92833 1246 aaPredicted RBP22.23■■□□□ 1.15
TFF3-201ENST00000291525 SLC4A2P04920 1241 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 FMR1Q06787 632 aaKnown RBP eCLIP22.22■■□□□ 1.15
TFF3-201ENST00000291525 DOK7Q18PE1 504 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 CDC37L1Q7L3B6 337 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 TRPM4Q8TD43 1214 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
TFF3-201ENST00000291525 WBP1LQ9NX94 342 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 ZBTB12Q9Y330 459 aaPredicted RBP22.22■■□□□ 1.15
TFF3-201ENST00000291525 TLL2Q9Y6L7 1015 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 XDHP47989 1333 aa22.22■■□□□ 1.15
TFF3-201ENST00000291525 CELF2O95319 508 aaKnown RBP22.21■■□□□ 1.15
TFF3-201ENST00000291525 IGKV5-2P06315 115 aa22.21■■□□□ 1.15
TFF3-201ENST00000291525 CST9Q5W186 159 aa22.21■■□□□ 1.15
TFF3-201ENST00000291525 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
TFF3-201ENST00000291525 GLIS2Q9BZE0 524 aaPredicted RBP22.21■■□□□ 1.15
TFF3-201ENST00000291525 PRDM10Q9NQV6 1147 aa22.21■■□□□ 1.15
TFF3-201ENST00000291525 THSD7BQ9C0I4 1608 aa22.2■■□□□ 1.15
TFF3-201ENST00000291525 HIRAP54198 1017 aaPredicted RBP22.2■■□□□ 1.14
TFF3-201ENST00000291525 CAPNS2Q96L46 248 aa22.2■■□□□ 1.14
TFF3-201ENST00000291525 GPR101Q96P66 508 aaPredicted RBP22.2■■□□□ 1.14
TFF3-201ENST00000291525 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
TFF3-201ENST00000291525 NEURL1BA8MQ27 555 aa22.19■■□□□ 1.14
TFF3-201ENST00000291525 ATP2B4P23634 1241 aa22.19■■□□□ 1.14
TFF3-201ENST00000291525 FLIIQ13045 1269 aa22.19■■□□□ 1.14
TFF3-201ENST00000291525 MYH16Q9H6N6 1097 aa22.19■■□□□ 1.14
TFF3-201ENST00000291525 SPEF2Q9C093 1822 aa22.18■■□□□ 1.14
TFF3-201ENST00000291525 RTL9Q8NET4 1388 aa22.18■■□□□ 1.14
TFF3-201ENST00000291525 FKBP5Q13451 457 aaPredicted RBP22.18■■□□□ 1.14
TFF3-201ENST00000291525 CWF19L2Q2TBE0 894 aaKnown RBP22.18■■□□□ 1.14
TFF3-201ENST00000291525 G2E3Q7L622 706 aa22.18■■□□□ 1.14
TFF3-201ENST00000291525 BEGAINQ9BUH8 593 aa22.18■■□□□ 1.14
TFF3-201ENST00000291525 SCN9AQ15858 1988 aa22.18■■□□□ 1.14
TFF3-201ENST00000291525 PSME4Q14997 1843 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 SHTN1A0MZ66 631 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 VIL1P09327 827 aaKnown RBP22.17■■□□□ 1.14
TFF3-201ENST00000291525 GRM1Q13255 1194 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 SAMD7Q7Z3H4 446 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 TTLL11Q8NHH1 800 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 ZNF408Q9H9D4 720 aa22.17■■□□□ 1.14
TFF3-201ENST00000291525 TBC1D10BQ4KMP7 808 aaPredicted RBP22.16■■□□□ 1.14
TFF3-201ENST00000291525 CYP4F22Q6NT55 531 aa22.16■■□□□ 1.14
TFF3-201ENST00000291525 UBE3BQ7Z3V4 1068 aa22.16■■□□□ 1.14
TFF3-201ENST00000291525 SAPCD2Q86UD0 394 aa22.16■■□□□ 1.14
TFF3-201ENST00000291525 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
TFF3-201ENST00000291525 HHIPL1Q96JK4 782 aa22.16■■□□□ 1.14
TFF3-201ENST00000291525 BSDC1Q9NW68 430 aaPredicted RBP22.16■■□□□ 1.14
TFF3-201ENST00000291525 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
TFF3-201ENST00000291525 ZNF609O15014 1411 aa22.15■■□□□ 1.14
TFF3-201ENST00000291525 H7C1W4 665 aa22.15■■□□□ 1.14
TFF3-201ENST00000291525 CAPN15O75808 1086 aa22.15■■□□□ 1.14
TFF3-201ENST00000291525 DCPSQ96C86 337 aaKnown RBP22.15■■□□□ 1.14
TFF3-201ENST00000291525 GREM2Q9H772 168 aa22.15■■□□□ 1.14
TFF3-201ENST00000291525 KCNQ5Q9NR82 932 aa22.15■■□□□ 1.14
TFF3-201ENST00000291525 IGHMBP2P38935 993 aaKnown RBP22.14■■□□□ 1.13
TFF3-201ENST00000291525 GCKRQ14397 625 aa22.14■■□□□ 1.13
TFF3-201ENST00000291525 KIF4BQ2VIQ3 1234 aa22.14■■□□□ 1.13
TFF3-201ENST00000291525 USP48Q86UV5 1035 aa22.14■■□□□ 1.13
TFF3-201ENST00000291525 AGBL3Q8NEM8 1001 aa22.14■■□□□ 1.13
TFF3-201ENST00000291525 MED23Q9ULK4 1368 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 POLR2AP24928 1970 aaKnown RBP22.13■■□□□ 1.13
TFF3-201ENST00000291525 VAMP4O75379 141 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 MAP2K2P36507 400 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 LBX1P52954 281 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 RBM26Q5T8P6 1007 aaKnown RBP22.13■■□□□ 1.13
TFF3-201ENST00000291525 RSBN1LQ6PCB5 846 aaPredicted RBP22.13■■□□□ 1.13
TFF3-201ENST00000291525 KRT26Q7Z3Y9 468 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 PODNQ7Z5L7 613 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
TFF3-201ENST00000291525 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
TFF3-201ENST00000291525 MINPP1Q9UNW1 487 aa22.12■■□□□ 1.13
TFF3-201ENST00000291525 HSPA8P11142 646 aaKnown RBP22.11■■□□□ 1.13
TFF3-201ENST00000291525 USP17L3A6NCW0 530 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 USP17L4A6NCW7 530 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 EGFRP00533 1210 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
TFF3-201ENST00000291525 USP17L1Q7RTZ2 530 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 SULF1Q8IWU6 871 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 MPHOSPH8Q99549 860 aa22.1■■□□□ 1.13
TFF3-201ENST00000291525 ITGA6P23229 1130 aa22.09■■□□□ 1.13
TFF3-201ENST00000291525 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
TFF3-201ENST00000291525 ANKRD2Q9GZV1 360 aa22.09■■□□□ 1.13
TFF3-201ENST00000291525 LEMD3Q9Y2U8 911 aa22.09■■□□□ 1.13
TFF3-201ENST00000291525 CA12O43570 354 aa22.08■■□□□ 1.13
TFF3-201ENST00000291525 HUNKP57058 714 aa22.08■■□□□ 1.13
TFF3-201ENST00000291525 C2orf69Q8N8R5 385 aa22.08■■□□□ 1.13
TFF3-201ENST00000291525 GGA3Q9NZ52 723 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms