RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CTAGE9A4FU28 777 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 ACTN2P35609 894 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CALM1P0DP23 149 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CALM2P0DP24 149 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CALM3P0DP25 149 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 ASIC1P78348 528 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 TBC1D5Q92609 795 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 RBM8AQ9Y5S9 174 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 TTC31Q49AM3 519 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CCDC174Q6PII3 467 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 UIMC1Q96RL1 719 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 PLCB3Q01970 1234 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 WTAPQ15007 396 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 IFNKQ9P0W0 207 aa19.13■□□□□ 0.65
TSPAN3-201ENST00000267970 CCDC121Q6ZUS5 278 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 UBXN1Q04323 297 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 PCDHB15Q9Y5E8 787 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 CPA1P15085 419 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 PLEKHA4Q9H4M7 779 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 FOXO3O43524 673 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 ERCC3P19447 782 aa19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 IFIT1BQ5T764 474 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-201ENST00000267970 UVSSAQ2YD98 709 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 LONRF3Q496Y0 759 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 ZNF622Q969S3 477 aaKnown RBP eCLIP19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 GOLGA6L9A6NEM1 432 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 GRM1Q13255 1194 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 APOBRQ0VD83 1088 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 KRBA2Q6ZNG9 492 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 TSPY3P0CV98 308 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 TSPY8P0CW00 308 aa19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 ERCC5P28715 1186 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 UTP14AQ9BVJ6 771 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.11■□□□□ 0.65
TSPAN3-201ENST00000267970 HPDP32754 393 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 UAP1Q16222 522 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 THEMISQ8N1K5 641 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 UBLCP1Q8WVY7 318 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 MCM7P33993 719 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 GOLGA1Q92805 767 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 RTL1A6NKG5 1358 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 CYLC1P35663 651 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 CCT6AP40227 531 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 TYRO3Q06418 890 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 ZBTB43O43298 467 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 MCM5P33992 734 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 SLU7O95391 586 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
TSPAN3-201ENST00000267970 KIF5BP33176 963 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 CHPF2Q9P2E5 772 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 SP4Q02446 784 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 NAIPQ13075 1403 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 PDE4BQ07343 736 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 CPLX4Q7Z7G2 160 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 NUCB1Q02818 461 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 MRPS27Q92552 414 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 CEP83Q9Y592 693 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 CCDC114Q96M63 670 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
TSPAN3-201ENST00000267970 F13A1P00488 732 aa19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 CYP7A1P22680 504 aa19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 SELENOOQ9BVL4 669 aa19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 RHPN1Q8TCX5 695 aa19.08■□□□□ 0.65
TSPAN3-201ENST00000267970 CCDC129Q6ZRS4 1044 aa19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 CWC25Q9NXE8 425 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 SEC24BO95487 1268 aa19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 NMIQ13287 307 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 SLC39A6Q13433 755 aa19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 NSRP1Q9H0G5 558 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 ATAD2Q6PL18 1390 aa19.08■□□□□ 0.64
TSPAN3-201ENST00000267970 PABPN1LA6NDY0 278 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 CLCN1P35523 988 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 RTN1Q16799 776 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 SEC62Q99442 399 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 ZWINTO95229 277 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 KANK3Q6NY19 840 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 FAM200AQ8TCP9 573 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 KSR1Q8IVT5 923 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 MIGA1Q8NAN2 632 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 PKD2L1Q9P0L9 805 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 EHMT1Q9H9B1 1298 aa19.07■□□□□ 0.64
TSPAN3-201ENST00000267970 DNAI2Q9GZS0 605 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 ZKSCAN5Q9Y2L8 839 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 TACC1O75410 805 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 RAB3IL1Q8TBN0 382 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 ESYT1Q9BSJ8 1104 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 ZSCAN16Q9H4T2 348 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 MAPK8IP1Q9UQF2 711 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms