RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 SPG7Q9UQ90 795 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 ZNF652Q9Y2D9 606 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 ATAD2BQ9ULI0 1458 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 LDHCP07864 332 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 IFIT1P09914 478 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 KANK4Q5T7N3 995 aaPredicted RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 ATP2A3Q93084 1043 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 SYNCQ9H7C4 482 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 RLBP1P12271 317 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 CCT6BQ92526 530 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 P3H4Q92791 437 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 TOP2AP11388 1531 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 RPL13P26373 211 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 CEP85LQ5SZL2 805 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 LRCH2Q5VUJ6 765 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.426e-7■■□□□ 12.6
XRN1-201ENST00000264951 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 SLC4A2P04920 1241 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 CALML3P27482 149 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 DBN1Q16643 649 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 EVI5LQ96CN4 794 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 CCDC124Q96CT7 223 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 PRDM10Q9NQV6 1147 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 LRP2BPQ9P2M1 347 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 ATP6V0A2Q9Y487 856 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 FAM169AQ9Y6X4 670 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 TATP17735 454 aaPredicted RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 CWC27Q6UX04 472 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 CNNM2Q9H8M5 875 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 MED4Q9NPJ6 270 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 DNAI1Q9UI46 699 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 POTEB3A0JP26 581 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 SYKP43405 635 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 POTEBQ6S5H4 581 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 NKTRP30414 1462 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 PDE4BQ07343 736 aa6.16□□□□□ -1.42
XRN1-201ENST00000264951 MRPS27Q92552 414 aaKnown RBP6.16□□□□□ -1.42
XRN1-201ENST00000264951 PTPRCP08575 1304 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 RNF40O75150 1001 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 STK10O94804 968 aaKnown RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 IARSP41252 1262 aaKnown RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 STK3Q13188 491 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 SEL1L2Q5TEA6 688 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 RGS22Q8NE09 1264 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 CCDC68Q9H2F9 335 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 TCERG1LQ5VWI1 586 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 PLCD3Q8N3E9 789 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 EPSTI1Q96J88 318 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 KCNG1Q9UIX4 513 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 CAVIN4Q5BKX8 364 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 NUTM2DQ5VT03 806 aaPredicted RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 NUTM2AQ8IVF1 878 aaPredicted RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 CCDC63Q8NA47 563 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 NOB1Q9ULX3 412 aaKnown RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 SPTY2D1Q68D10 685 aaPredicted RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 GFM2Q969S9 779 aaKnown RBP6.15□□□□□ -1.42
XRN1-201ENST00000264951 SNX21Q969T3 373 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 CABS1Q96KC9 395 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 ADAMTS8Q9UP79 889 aa6.15□□□□□ -1.42
XRN1-201ENST00000264951 PPP2R1AP30153 589 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 EVCP57679 992 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 NAA16Q6N069 864 aaPredicted RBP6.15□□□□□ -1.43
XRN1-201ENST00000264951 SYCP3Q8IZU3 236 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 INTS4Q96HW7 963 aaKnown RBP6.15□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA6CA6NDK9 693 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA6DP0CG33 693 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 ATP2B2Q01814 1243 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.43
XRN1-201ENST00000264951 UBL4BQ8N7F7 174 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 HOMER3Q9NSC5 361 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA6AQ9NYA3 693 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 VPS18Q9P253 973 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 FHOD3Q2V2M9 1422 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 MINK1Q8N4C8 1332 aaPredicted RBP6.15□□□□□ -1.43
XRN1-201ENST00000264951 UNC13AQ9UPW8 1703 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 SYT1P21579 422 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 PAK2Q13177 524 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 CAMK4Q16566 473 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 BRAPQ7Z569 592 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 MTHFSP49914 203 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 DDX27Q96GQ7 796 aaKnown RBP6.15□□□□□ -1.43
XRN1-201ENST00000264951 GLT8D2Q9H1C3 349 aa6.15□□□□□ -1.43
XRN1-201ENST00000264951 MAPK8IP2Q13387 824 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 BRD3Q15059 726 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 HS2ST1Q7LGA3 356 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ATP8B1O43520 1251 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 SATB1Q01826 763 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 GKAP1Q5VSY0 366 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 FCHSD1Q86WN1 690 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 VSIG1Q86XK7 387 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 PUS7Q96PZ0 661 aaKnown RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 TRMT1Q9NXH9 659 aaKnown RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 FGD6Q6ZV73 1430 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CEP104O60308 925 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms