RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CRY2Q49AN0 593 aa27.81■■■□□ 2.04
UFD1-201ENST00000263202 VGLL2Q8N8G2 317 aa27.81■■■□□ 2.04
UFD1-201ENST00000263202 CELF1Q92879 486 aaKnown RBP27.81■■■□□ 2.04
UFD1-201ENST00000263202 MROH5Q6ZUA9 1318 aa27.81■■■□□ 2.04
UFD1-201ENST00000263202 DDX46Q7L014 1031 aaKnown RBP27.8■■■□□ 2.04
UFD1-201ENST00000263202 GPATCH3Q96I76 525 aa27.8■■■□□ 2.04
UFD1-201ENST00000263202 ECHDC1Q9NTX5 307 aa27.8■■■□□ 2.04
UFD1-201ENST00000263202 DBNLQ9UJU6 430 aaKnown RBP27.8■■■□□ 2.04
UFD1-201ENST00000263202 AKAP2Q9Y2D5 859 aa27.8■■■□□ 2.04
UFD1-201ENST00000263202 KLRG2A4D1S0 409 aaPredicted RBP27.78■■■□□ 2.04
UFD1-201ENST00000263202 TIMM10P62072 90 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 BSDC1Q9NW68 430 aaPredicted RBP27.78■■■□□ 2.04
UFD1-201ENST00000263202 AK9Q5TCS8 1911 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 A0A1B0GUL7 405 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 PDE8BO95263 885 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 SLC16A10Q8TF71 515 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 DBNDD2Q9BQY9 259 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 BRIP1Q9BX63 1249 aa27.78■■■□□ 2.04
UFD1-201ENST00000263202 RPS8P62241 208 aaKnown RBP27.77■■■□□ 2.04
UFD1-201ENST00000263202 NEUROD6Q96NK8 337 aa27.77■■■□□ 2.04
UFD1-201ENST00000263202 ARAP2Q8WZ64 1704 aa27.77■■■□□ 2.04
UFD1-201ENST00000263202 SDSP20132 328 aa27.76■■■□□ 2.04
UFD1-201ENST00000263202 TSHZ2Q9NRE2 1034 aa27.76■■■□□ 2.04
UFD1-201ENST00000263202 ERC2O15083 957 aa27.76■■■□□ 2.03
UFD1-201ENST00000263202 RPGRQ92834 1020 aaKnown RBP27.76■■■□□ 2.03
UFD1-201ENST00000263202 GLRX3O76003 335 aaKnown RBP27.75■■■□□ 2.03
UFD1-201ENST00000263202 HELBQ8NG08 1087 aaPredicted RBP27.75■■■□□ 2.03
UFD1-201ENST00000263202 CHRNDQ07001 517 aa27.74■■■□□ 2.03
UFD1-201ENST00000263202 ATP2B3Q16720 1220 aa27.74■■■□□ 2.03
UFD1-201ENST00000263202 COL11A2P13942 1736 aaPredicted RBP27.74■■■□□ 2.03
UFD1-201ENST00000263202 GRAPQ13588 217 aa27.74■■■□□ 2.03
UFD1-201ENST00000263202 GRAPLQ8TC17 118 aaPredicted RBP27.74■■■□□ 2.03
UFD1-201ENST00000263202 HOXA10P31260 410 aaPredicted RBP27.72■■■□□ 2.03
UFD1-201ENST00000263202 RBM17Q96I25 401 aaKnown RBP27.72■■■□□ 2.03
UFD1-201ENST00000263202 MINPP1Q9UNW1 487 aa27.72■■■□□ 2.03
UFD1-201ENST00000263202 TAF5LO75529 589 aa27.71■■■□□ 2.03
UFD1-201ENST00000263202 FGFR2P21802 821 aa27.71■■■□□ 2.03
UFD1-201ENST00000263202 PUM3Q15397 648 aaKnown RBP27.71■■■□□ 2.03
UFD1-201ENST00000263202 XAGE2Q96GT9 111 aa27.71■■■□□ 2.03
UFD1-201ENST00000263202 ATP5JP18859 108 aa27.71■■■□□ 2.03
UFD1-201ENST00000263202 PDE6BP35913 854 aa27.71■■■□□ 2.03
UFD1-201ENST00000263202 ADORA1P30542 326 aa27.7■■■□□ 2.02
UFD1-201ENST00000263202 TRIM6-TRIM34B2RNG4 842 aa27.69■■■□□ 2.02
UFD1-201ENST00000263202 LPIN2Q92539 896 aa27.69■■■□□ 2.02
UFD1-201ENST00000263202 CRAMP1Q96RY5 1269 aa27.69■■■□□ 2.02
UFD1-201ENST00000263202 MAP4K4O95819 1239 aaPredicted RBP27.69■■■□□ 2.02
UFD1-201ENST00000263202 CDC45O75419 566 aa27.68■■■□□ 2.02
UFD1-201ENST00000263202 SRGNP10124 158 aa27.68■■■□□ 2.02
UFD1-201ENST00000263202 RILPL2Q969X0 211 aa27.68■■■□□ 2.02
UFD1-201ENST00000263202 BOLA2Q9H3K6 86 aa27.68■■■□□ 2.02
UFD1-201ENST00000263202 R3HDM1Q15032 1099 aaKnown RBP27.67■■■□□ 2.02
UFD1-201ENST00000263202 SNAP23O00161 211 aa27.67■■■□□ 2.02
UFD1-201ENST00000263202 SLC5A1P13866 664 aa27.66■■■□□ 2.02
UFD1-201ENST00000263202 GORABQ5T7V8 394 aa27.66■■■□□ 2.02
UFD1-201ENST00000263202 TBC1D9Q6ZT07 1266 aa27.66■■■□□ 2.02
UFD1-201ENST00000263202 NPR1P16066 1061 aa27.65■■■□□ 2.02
UFD1-201ENST00000263202 CCDC158Q5M9N0 1113 aa27.65■■■□□ 2.02
UFD1-201ENST00000263202 CNTROBQ8N137 903 aa27.65■■■□□ 2.02
UFD1-201ENST00000263202 CACNA1SQ13698 1873 aa27.65■■■□□ 2.02
UFD1-201ENST00000263202 LRRC37AA6NMS7 1700 aa27.65■■■□□ 2.02
UFD1-201ENST00000263202 SEC24BO95487 1268 aa27.64■■■□□ 2.02
UFD1-201ENST00000263202 ANKRD2Q9GZV1 360 aa27.64■■■□□ 2.02
UFD1-201ENST00000263202 BBOX1O75936 387 aa27.64■■■□□ 2.01
UFD1-201ENST00000263202 ZBTB7AO95365 584 aa27.63■■■□□ 2.01
UFD1-201ENST00000263202 IFIT1P09914 478 aaKnown RBP27.63■■■□□ 2.01
UFD1-201ENST00000263202 HAUS7Q99871 368 aa27.63■■■□□ 2.01
UFD1-201ENST00000263202 KIF13BQ9NQT8 1826 aa27.63■■■□□ 2.01
UFD1-201ENST00000263202 AKAP11Q9UKA4 1901 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 UBE4AQ14139 1066 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 TTC39AQ5SRH9 613 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 ILDR2Q71H61 639 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.62■■■□□ 2.017e-8■□□□□ 8.2
UFD1-201ENST00000263202 MASTLQ96GX5 879 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 MTFR1LQ9H019 292 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 C10orf71Q711Q0 1435 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 SLC51AQ86UW1 340 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 EVI5LQ96CN4 794 aa27.62■■■□□ 2.01
UFD1-201ENST00000263202 WTIPA6NIX2 430 aaPredicted RBP27.61■■■□□ 2.01
UFD1-201ENST00000263202 C2CD5Q86YS7 1000 aa27.61■■■□□ 2.01
UFD1-201ENST00000263202 DLEC1Q9Y238 1755 aa27.6■■■□□ 2.01
UFD1-201ENST00000263202 ALDH1B1P30837 517 aa27.6■■■□□ 2.01
UFD1-201ENST00000263202 CCDC102BQ68D86 513 aa27.6■■■□□ 2.01
UFD1-201ENST00000263202 ZNF512BQ96KM6 892 aaPredicted RBP27.6■■■□□ 2.01
UFD1-201ENST00000263202 H0YIN7 160 aa27.59■■■□□ 2.01
UFD1-201ENST00000263202 TMC4Q7Z404 712 aa27.59■■■□□ 2.01
UFD1-201ENST00000263202 ATF5Q9Y2D1 282 aaPredicted RBP27.59■■■□□ 2.01
UFD1-201ENST00000263202 NDUFB9Q9Y6M9 179 aa27.59■■■□□ 2.01
UFD1-201ENST00000263202 PPEF1O14829 653 aaPredicted RBP27.58■■■□□ 2.01
UFD1-201ENST00000263202 PHKA1P46020 1223 aa27.58■■■□□ 2.01
UFD1-201ENST00000263202 CASC1Q6TDU7 716 aa27.58■■■□□ 2.01
UFD1-201ENST00000263202 EDC3Q96F86 508 aaKnown RBP27.58■■■□□ 2.01
UFD1-201ENST00000263202 DNAJC2Q99543 621 aaKnown RBP27.58■■■□□ 2.01
UFD1-201ENST00000263202 CHMLP26374 656 aa27.57■■■□□ 2
UFD1-201ENST00000263202 STYK1Q6J9G0 422 aa27.57■■■□□ 2
UFD1-201ENST00000263202 LTBP1Q14766 1721 aa27.57■■■□□ 2
UFD1-201ENST00000263202 PSDA5PKW4 1024 aaPredicted RBP27.57■■■□□ 2
UFD1-201ENST00000263202 ARID4AP29374 1257 aaPredicted RBP27.57■■■□□ 2
UFD1-201ENST00000263202 SCARF1Q14162 830 aa27.57■■■□□ 2
UFD1-201ENST00000263202 XDHP47989 1333 aa27.56■■■□□ 2
UFD1-201ENST00000263202 KCNJ4P48050 445 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms