RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IGHMBP2P38935 993 aaKnown RBP27.91■■■□□ 2.06
SMARCB1-201ENST00000263121 MPHOSPH8Q99549 860 aa27.91■■■□□ 2.06
SMARCB1-201ENST00000263121 CHMLP26374 656 aa27.91■■■□□ 2.06
SMARCB1-201ENST00000263121 PRR5LQ6MZQ0 368 aa27.91■■■□□ 2.06
SMARCB1-201ENST00000263121 CCDC24Q8N4L8 307 aa27.91■■■□□ 2.06
SMARCB1-201ENST00000263121 PDE8BO95263 885 aa27.9■■■□□ 2.06
SMARCB1-201ENST00000263121 DDR1Q08345 913 aa27.9■■■□□ 2.06
SMARCB1-201ENST00000263121 SERPINB2P05120 415 aa27.89■■■□□ 2.06
SMARCB1-201ENST00000263121 EVI5LQ96CN4 794 aa27.89■■■□□ 2.06
SMARCB1-201ENST00000263121 BOLA2Q9H3K6 86 aa27.89■■■□□ 2.06
SMARCB1-201ENST00000263121 QSER1Q2KHR3 1735 aa27.89■■■□□ 2.06
SMARCB1-201ENST00000263121 POLRMTO00411 1230 aaKnown RBP27.88■■■□□ 2.05
SMARCB1-201ENST00000263121 NPHP1O15259 732 aa27.88■■■□□ 2.05
SMARCB1-201ENST00000263121 ATP2B3Q16720 1220 aa27.88■■■□□ 2.05
SMARCB1-201ENST00000263121 ANO8Q9HCE9 1232 aaPredicted RBP27.88■■■□□ 2.05
SMARCB1-201ENST00000263121 BAG6P46379 1132 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 SF3B2Q13435 895 aaKnown RBP27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 NLGN1Q8N2Q7 840 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 ARAP2Q8WZ64 1704 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 ANKRD18AQ8IVF6 992 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 XAGE2Q96GT9 111 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 C22orf23Q9BZE7 217 aa27.87■■■□□ 2.05
SMARCB1-201ENST00000263121 TAF1P21675 1872 aa27.86■■■□□ 2.05
SMARCB1-201ENST00000263121 ADORA1P30542 326 aa27.86■■■□□ 2.05
SMARCB1-201ENST00000263121 SLC15A2Q16348 729 aa27.86■■■□□ 2.05
SMARCB1-201ENST00000263121 NRXN2Q9P2S2 1712 aa27.86■■■□□ 2.05
SMARCB1-201ENST00000263121 A0A1B0GUL6 1792 aa27.85■■■□□ 2.05
SMARCB1-201ENST00000263121 MSH5O43196 834 aa27.85■■■□□ 2.05
SMARCB1-201ENST00000263121 FGFR2P21802 821 aa27.85■■■□□ 2.05
SMARCB1-201ENST00000263121 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
SMARCB1-201ENST00000263121 HAUS7Q99871 368 aa27.85■■■□□ 2.05
SMARCB1-201ENST00000263121 ST5P78524 1137 aa27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 PUM3Q15397 648 aaKnown RBP27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 ESYT1Q9BSJ8 1104 aa27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 BSDC1Q9NW68 430 aaPredicted RBP27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 CELF1Q92879 486 aaKnown RBP27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 STK32BQ9NY57 414 aa27.84■■■□□ 2.05
SMARCB1-201ENST00000263121 HELBQ8NG08 1087 aaPredicted RBP27.83■■■□□ 2.05
SMARCB1-201ENST00000263121 RBM25P49756 843 aaKnown RBP27.82■■■□□ 2.04
SMARCB1-201ENST00000263121 DEFB132Q7Z7B7 95 aa27.82■■■□□ 2.04
SMARCB1-201ENST00000263121 LPIN2Q92539 896 aa27.82■■■□□ 2.04
SMARCB1-201ENST00000263121 CHRNDQ07001 517 aa27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 CCDC158Q5M9N0 1113 aa27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 REC8O95072 547 aa27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 RPS8P62241 208 aaKnown RBP27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 GORABQ5T7V8 394 aa27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 DDX46Q7L014 1031 aaKnown RBP27.81■■■□□ 2.04
SMARCB1-201ENST00000263121 CRY2Q49AN0 593 aa27.8■■■□□ 2.04
SMARCB1-201ENST00000263121 TAF5LO75529 589 aa27.79■■■□□ 2.04
SMARCB1-201ENST00000263121 IFIT1P09914 478 aaKnown RBP27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 TTC39AQ5SRH9 613 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 EDC3Q96F86 508 aaKnown RBP27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 ZNF512BQ96KM6 892 aaPredicted RBP27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 DNAJC2Q99543 621 aaKnown RBP27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 USP26Q9BXU7 913 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 RFX7Q2KHR2 1363 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 SLC5A1P13866 664 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 MINPP1Q9UNW1 487 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 NDUFB9Q9Y6M9 179 aa27.78■■■□□ 2.04
SMARCB1-201ENST00000263121 HIP1O00291 1037 aa27.77■■■□□ 2.04
SMARCB1-201ENST00000263121 FSD1Q9BTV5 496 aa27.77■■■□□ 2.04
SMARCB1-201ENST00000263121 DIAPH3Q9NSV4 1193 aa27.77■■■□□ 2.04
SMARCB1-201ENST00000263121 KLRG2A4D1S0 409 aaPredicted RBP27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 SGSM2O43147 1006 aa27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 CCDC125Q86Z20 511 aa27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 IPO9Q96P70 1041 aaKnown RBP27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 IL25Q9H293 177 aa27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 ANKRD31Q8N7Z5 1873 aa27.76■■■□□ 2.03
SMARCB1-201ENST00000263121 MMP10P09238 476 aa27.75■■■□□ 2.03
SMARCB1-201ENST00000263121 GRAPQ13588 217 aa27.75■■■□□ 2.03
SMARCB1-201ENST00000263121 GRAPLQ8TC17 118 aaPredicted RBP27.75■■■□□ 2.03
SMARCB1-201ENST00000263121 PAG1Q9NWQ8 432 aa27.75■■■□□ 2.03
SMARCB1-201ENST00000263121 SNAP23O00161 211 aa27.75■■■□□ 2.03
SMARCB1-201ENST00000263121 TICAM2Q86XR7 235 aa27.74■■■□□ 2.03
SMARCB1-201ENST00000263121 KBTBD3Q8NAB2 608 aa27.74■■■□□ 2.03
SMARCB1-201ENST00000263121 RPGRQ92834 1020 aaKnown RBP27.74■■■□□ 2.03
SMARCB1-201ENST00000263121 DDRGK1Q96HY6 314 aa27.74■■■□□ 2.03
SMARCB1-201ENST00000263121 ARID4AP29374 1257 aaPredicted RBP27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 SCARF1Q14162 830 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 CCDC102BQ68D86 513 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 MSL1Q68DK7 614 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 CWC27Q6UX04 472 aaKnown RBP27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 RUFY2Q8WXA3 655 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 PARP3Q9Y6F1 533 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 AKAP11Q9UKA4 1901 aa27.73■■■□□ 2.03
SMARCB1-201ENST00000263121 GOLIM4O00461 696 aa27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 UBE4AQ14139 1066 aa27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 EPB41L2O43491 1005 aaKnown RBP27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 HOXA10P31260 410 aaPredicted RBP27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 PHKA1P46020 1223 aa27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 BRIP1Q9BX63 1249 aa27.72■■■□□ 2.03
SMARCB1-201ENST00000263121 UQCRFS1P1P0C7P4 283 aa27.71■■■□□ 2.03
SMARCB1-201ENST00000263121 ANKRD2Q9GZV1 360 aa27.71■■■□□ 2.03
SMARCB1-201ENST00000263121 RAD50Q92878 1312 aa27.7■■■□□ 2.03
SMARCB1-201ENST00000263121 MCAMP43121 646 aa27.7■■■□□ 2.02
SMARCB1-201ENST00000263121 NMIQ13287 307 aaPredicted RBP27.7■■■□□ 2.02
SMARCB1-201ENST00000263121 RBM17Q96I25 401 aaKnown RBP27.7■■■□□ 2.02
SMARCB1-201ENST00000263121 SNRKQ9NRH2 765 aa27.7■■■□□ 2.02
SMARCB1-201ENST00000263121 FAM227BQ96M60 508 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms