RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 TCEANC2Q96MN5 208 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 ST18O60284 1047 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 MCCP23508 829 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
FOXF1-201ENST00000262426 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
FOXF1-201ENST00000262426 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
FOXF1-201ENST00000262426 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
FOXF1-201ENST00000262426 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
FOXF1-201ENST00000262426 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
FOXF1-201ENST00000262426 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
FOXF1-201ENST00000262426 PHF14O94880 888 aa17.36■□□□□ 0.37
FOXF1-201ENST00000262426 CTSWP56202 376 aa17.36■□□□□ 0.37
FOXF1-201ENST00000262426 SNX14Q9Y5W7 946 aa17.36■□□□□ 0.37
FOXF1-201ENST00000262426 TJP1Q07157 1748 aa17.36■□□□□ 0.37
FOXF1-201ENST00000262426 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 SCARF1Q14162 830 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 METTL24Q5JXM2 366 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.35■□□□□ 0.37
FOXF1-201ENST00000262426 TAF5LO75529 589 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 OFD1O75665 1012 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 ATP5JP18859 108 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
FOXF1-201ENST00000262426 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
FOXF1-201ENST00000262426 HSPA4P34932 840 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 ZNF34Q8IZ26 560 aa17.35■□□□□ 0.37
FOXF1-201ENST00000262426 RAD50Q92878 1312 aa17.34■□□□□ 0.37
FOXF1-201ENST00000262426 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
FOXF1-201ENST00000262426 CSF1RP07333 972 aa17.34■□□□□ 0.37
FOXF1-201ENST00000262426 SSFA2P28290 1259 aa17.34■□□□□ 0.37
FOXF1-201ENST00000262426 WTIPA6NIX2 430 aaPredicted RBP17.34■□□□□ 0.37
FOXF1-201ENST00000262426 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
FOXF1-201ENST00000262426 XAGE2Q96GT9 111 aa17.34■□□□□ 0.37
FOXF1-201ENST00000262426 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.37
FOXF1-201ENST00000262426 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.37
FOXF1-201ENST00000262426 FOXD4L6Q3SYB3 417 aaPredicted RBP17.33■□□□□ 0.36
FOXF1-201ENST00000262426 FOXD4L3Q6VB84 417 aaPredicted RBP17.33■□□□□ 0.36
FOXF1-201ENST00000262426 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
FOXF1-201ENST00000262426 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
FOXF1-201ENST00000262426 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
FOXF1-201ENST00000262426 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
FOXF1-201ENST00000262426 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
FOXF1-201ENST00000262426 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
FOXF1-201ENST00000262426 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.36
FOXF1-201ENST00000262426 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
FOXF1-201ENST00000262426 GNPATO15228 680 aa17.32■□□□□ 0.36
FOXF1-201ENST00000262426 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 PDE8AO60658 829 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
FOXF1-201ENST00000262426 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
FOXF1-201ENST00000262426 COL15A1P39059 1388 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 RNF214Q8ND24 703 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
FOXF1-201ENST00000262426 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
FOXF1-201ENST00000262426 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
FOXF1-201ENST00000262426 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 HAUS7Q99871 368 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 CCDC171Q6TFL3 1326 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
FOXF1-201ENST00000262426 DDIT3P35638 169 aa17.3■□□□□ 0.36
FOXF1-201ENST00000262426 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
FOXF1-201ENST00000262426 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
FOXF1-201ENST00000262426 NUP98P52948 1817 aa17.3■□□□□ 0.36
FOXF1-201ENST00000262426 SPATA31A6Q5VVP1 1343 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
FOXF1-201ENST00000262426 ZAP70P43403 619 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 ERFEQ4G0M1 354 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
FOXF1-201ENST00000262426 IQSEC3Q9UPP2 1182 aaPredicted RBP17.29■□□□□ 0.36
FOXF1-201ENST00000262426 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
FOXF1-201ENST00000262426 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
FOXF1-201ENST00000262426 UTRNP46939 3433 aa17.28■□□□□ 0.36
FOXF1-201ENST00000262426 AK2P54819 239 aa17.28■□□□□ 0.36
FOXF1-201ENST00000262426 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
FOXF1-201ENST00000262426 CIAO1O76071 339 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 CCDC173Q0VFZ6 552 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 ZNF609O15014 1411 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 NECTIN1Q15223 517 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.36
FOXF1-201ENST00000262426 LARGE1O95461 756 aa17.27■□□□□ 0.35
FOXF1-201ENST00000262426 NTSR2O95665 410 aa17.27■□□□□ 0.35
FOXF1-201ENST00000262426 PPP4R3BQ5MIZ7 849 aa17.27■□□□□ 0.35
FOXF1-201ENST00000262426 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.35
FOXF1-201ENST00000262426 KBTBD3Q8NAB2 608 aa17.27■□□□□ 0.35
FOXF1-201ENST00000262426 MAP4K1Q92918 833 aa17.26■□□□□ 0.35
FOXF1-201ENST00000262426 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
FOXF1-201ENST00000262426 PHKA1P46020 1223 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms