RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
TRAF4-202ENST00000262396 SEC31BQ9NQW1 1179 aa15.7■□□□□ 0.1
TRAF4-202ENST00000262396 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
TRAF4-202ENST00000262396 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-202ENST00000262396 YDJCA8MPS7 323 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
TRAF4-202ENST00000262396 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-202ENST00000262396 KSR2Q6VAB6 950 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 USP48Q86UV5 1035 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 TRPM4Q8TD43 1214 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 DPF2Q92785 391 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 TLL2Q9Y6L7 1015 aa15.69■□□□□ 0.1
TRAF4-202ENST00000262396 PCNTO95613 3336 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 ADAMTSL1Q8N6G6 1762 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 CST9Q5W186 159 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
TRAF4-202ENST00000262396 LAMB2P55268 1798 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 TSPYL6Q8N831 410 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 LTBP1Q14766 1721 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 XDHP47989 1333 aa15.67■□□□□ 0.1
TRAF4-202ENST00000262396 ATP2B4P23634 1241 aa15.66■□□□□ 0.1
TRAF4-202ENST00000262396 IGHMBP2P38935 993 aaKnown RBP15.66■□□□□ 0.1
TRAF4-202ENST00000262396 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-202ENST00000262396 CTSWP56202 376 aa15.66■□□□□ 0.1
TRAF4-202ENST00000262396 SULF1Q8IWU6 871 aa15.66■□□□□ 0.1
TRAF4-202ENST00000262396 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
TRAF4-202ENST00000262396 C2orf69Q8N8R5 385 aa15.66■□□□□ 0.1
TRAF4-202ENST00000262396 SHTN1A0MZ66 631 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 AOC2O75106 756 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 MAP2K2P36507 400 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 HUNKP57058 714 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 FKBP5Q13451 457 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-202ENST00000262396 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 SAPCD2Q86UD0 394 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
TRAF4-202ENST00000262396 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
TRAF4-202ENST00000262396 DDX60Q8IY21 1712 aaKnown RBP15.64■□□□□ 0.09
TRAF4-202ENST00000262396 KCNQ5Q9NR82 932 aa15.64■□□□□ 0.09
TRAF4-202ENST00000262396 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
TRAF4-202ENST00000262396 TAF1P21675 1872 aa15.63■□□□□ 0.09
TRAF4-202ENST00000262396 KCNJ4P48050 445 aa15.63■□□□□ 0.09
TRAF4-202ENST00000262396 CWF19L2Q2TBE0 894 aaKnown RBP15.63■□□□□ 0.09
TRAF4-202ENST00000262396 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
TRAF4-202ENST00000262396 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
TRAF4-202ENST00000262396 MPHOSPH8Q99549 860 aa15.63■□□□□ 0.09
TRAF4-202ENST00000262396 CA12O43570 354 aa15.62■□□□□ 0.09
TRAF4-202ENST00000262396 VIL1P09327 827 aaKnown RBP15.62■□□□□ 0.09
TRAF4-202ENST00000262396 RSBN1LQ6PCB5 846 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-202ENST00000262396 GBA2Q9HCG7 927 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-202ENST00000262396 GGA3Q9NZ52 723 aa15.62■□□□□ 0.09
TRAF4-202ENST00000262396 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
TRAF4-202ENST00000262396 IL16Q14005 1332 aa15.62■□□□□ 0.09
TRAF4-202ENST00000262396 USP17L3A6NCW0 530 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 USP17L4A6NCW7 530 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 NEURL1BA8MQ27 555 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 ADM5C9JUS6 153 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 FLIIQ13045 1269 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 NOGQ13253 232 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 USP17L1Q7RTZ2 530 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 OGFOD1Q8N543 542 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 AGBL3Q8NEM8 1001 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 HHIPL1Q96JK4 782 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 GREM2Q9H772 168 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
TRAF4-202ENST00000262396 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-202ENST00000262396 USP17L8P0C7I0 530 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 G2E3Q7L622 706 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 TTLL11Q8NHH1 800 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 DNAAF4Q8WXU2 420 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-202ENST00000262396 RTL9Q8NET4 1388 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
TRAF4-202ENST00000262396 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
TRAF4-202ENST00000262396 ZNF157P51786 506 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-202ENST00000262396 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-202ENST00000262396 RGMBQ6NW40 437 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 CCDC102AQ96A19 550 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 ANKRD2Q9GZV1 360 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
TRAF4-202ENST00000262396 EGFRP00533 1210 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 ITGA6P23229 1130 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 SCARF1Q14162 830 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-202ENST00000262396 GCKRQ14397 625 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 ANGEL2Q5VTE6 544 aaKnown RBP15.58■□□□□ 0.08
TRAF4-202ENST00000262396 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms