RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ZSCAN16Q9H4T2 348 aaPredicted RBP19.99■□□□□ 0.79
CDK4-201ENST00000257904 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
CDK4-201ENST00000257904 SOS2Q07890 1332 aaPredicted RBP19.99■□□□□ 0.79
CDK4-201ENST00000257904 H3BQV1 296 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 CDC25BP30305 580 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 NEXNQ0ZGT2 675 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 Q6ZUG5 572 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 C16orf45Q96MC5 204 aaPredicted RBP19.98■□□□□ 0.79
CDK4-201ENST00000257904 NLRP2Q9NX02 1062 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 DBNLQ9UJU6 430 aaKnown RBP19.98■□□□□ 0.79
CDK4-201ENST00000257904 CFAP45Q9UL16 551 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 GCKRQ14397 625 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 CLIP2Q9UDT6 1046 aa19.98■□□□□ 0.79
CDK4-201ENST00000257904 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
CDK4-201ENST00000257904 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
CDK4-201ENST00000257904 SMTNL1A8MU46 457 aa19.97■□□□□ 0.79
CDK4-201ENST00000257904 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
CDK4-201ENST00000257904 DDX11Q96FC9 970 aa19.97■□□□□ 0.79
CDK4-201ENST00000257904 COPRSQ9NQ92 184 aa19.97■□□□□ 0.79
CDK4-201ENST00000257904 ZNF609O15014 1411 aa19.97■□□□□ 0.79
CDK4-201ENST00000257904 TNNI3KQ59H18 835 aa19.96■□□□□ 0.79
CDK4-201ENST00000257904 FPGT-TNNI3KV9GXZ4 949 aa19.96■□□□□ 0.79
CDK4-201ENST00000257904 CYP21A2P08686 494 aa19.96■□□□□ 0.79
CDK4-201ENST00000257904 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
CDK4-201ENST00000257904 CACTINQ8WUQ7 758 aaKnown RBP19.96■□□□□ 0.79
CDK4-201ENST00000257904 TNNT1P13805 278 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 NCBP1Q09161 790 aaKnown RBP19.95■□□□□ 0.78
CDK4-201ENST00000257904 SCRN1Q12765 414 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 IQCB1Q15051 598 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 SYCP1Q15431 976 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 CCDC144BQ3MJ40 725 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 SARM1Q6SZW1 724 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 CCDC129Q6ZRS4 1044 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 COL18A1P39060 1754 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 RFX5P48382 616 aaPredicted RBP19.95■□□□□ 0.78
CDK4-201ENST00000257904 RAPGEF4Q8WZA2 1011 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 MYD88Q99836 296 aa19.95■□□□□ 0.78
CDK4-201ENST00000257904 LLPHQ9BRT6 129 aaKnown RBP19.95■□□□□ 0.78
CDK4-201ENST00000257904 METTL22Q9BUU2 404 aaPredicted RBP19.95■□□□□ 0.78
CDK4-201ENST00000257904 CSB-PGBD3P0DP91 1061 aa19.94■□□□□ 0.78
CDK4-201ENST00000257904 ADD1P35611 737 aaKnown RBP19.94■□□□□ 0.78
CDK4-201ENST00000257904 TFCP2Q12800 502 aa19.94■□□□□ 0.78
CDK4-201ENST00000257904 XAGE3Q8WTP9 111 aa19.94■□□□□ 0.78
CDK4-201ENST00000257904 PAXBP1Q9Y5B6 917 aa19.94■□□□□ 0.78
CDK4-201ENST00000257904 C5P01031 1676 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 GOLGA6L19H0YKK7 550 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 CHGBP05060 677 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 MYL6BP14649 208 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 U2AF2P26368 475 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDK4-201ENST00000257904 PTPN12Q05209 780 aaKnown RBP19.93■□□□□ 0.78
CDK4-201ENST00000257904 MCMDC2Q4G0Z9 681 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 NAA16Q6N069 864 aaPredicted RBP19.93■□□□□ 0.78
CDK4-201ENST00000257904 SEC62Q99442 399 aaKnown RBP19.93■□□□□ 0.78
CDK4-201ENST00000257904 NDUFB9Q9Y6M9 179 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 CPDO75976 1380 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 CTAGE5O15320 804 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 PFKFB2O60825 505 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 ZNF790Q6PG37 636 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 C11orf57Q6ZUT1 292 aaPredicted RBP19.93■□□□□ 0.78
CDK4-201ENST00000257904 RCOR1Q9UKL0 485 aa19.93■□□□□ 0.78
CDK4-201ENST00000257904 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 STX1AQ16623 288 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 TPD52L1Q16890 204 aaPredicted RBP19.92■□□□□ 0.78
CDK4-201ENST00000257904 COPS6Q7L5N1 327 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 NSUN7Q8NE18 718 aaKnown RBP19.92■□□□□ 0.78
CDK4-201ENST00000257904 MRFAP1L1Q96HT8 127 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 DNAJC2Q99543 621 aaKnown RBP19.92■□□□□ 0.78
CDK4-201ENST00000257904 HAUS7Q99871 368 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 GTPBP4Q9BZE4 634 aaKnown RBP19.92■□□□□ 0.78
CDK4-201ENST00000257904 ABCC6O95255 1503 aa19.92■□□□□ 0.78
CDK4-201ENST00000257904 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
CDK4-201ENST00000257904 STOX1Q6ZVD7 989 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 LRRC2Q9BYS8 371 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 HMGB1P09429 215 aaKnown RBP19.91■□□□□ 0.78
CDK4-201ENST00000257904 SLC39A6Q13433 755 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 LRRC8AQ8IWT6 810 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 CCAR1Q8IX12 1150 aaKnown RBP19.91■□□□□ 0.78
CDK4-201ENST00000257904 DBNDD2Q9BQY9 259 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 MYH15Q9Y2K3 1946 aa19.91■□□□□ 0.78
CDK4-201ENST00000257904 NEMFO60524 1076 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 TATP17735 454 aaPredicted RBP19.9■□□□□ 0.78
CDK4-201ENST00000257904 FGD1P98174 961 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 RABL6Q3YEC7 729 aaPredicted RBP19.9■□□□□ 0.78
CDK4-201ENST00000257904 CCDC112Q8NEF3 446 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 FEZ1Q99689 392 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 GOLPH3LQ9H4A5 285 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 SH3TC1Q8TE82 1336 aa19.9■□□□□ 0.78
CDK4-201ENST00000257904 SNW1Q13573 536 aaKnown RBP19.9■□□□□ 0.78
CDK4-201ENST00000257904 FTOQ9C0B1 505 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■■□□□ 12.1
CDK4-201ENST00000257904 PTPDC1A2A3K4 754 aa19.89■□□□□ 0.77
CDK4-201ENST00000257904 CTDNEP1O95476 244 aa19.89■□□□□ 0.77
CDK4-201ENST00000257904 RBM6P78332 1123 aaKnown RBP19.89■□□□□ 0.77
CDK4-201ENST00000257904 DDX46Q7L014 1031 aaKnown RBP19.89■□□□□ 0.77
CDK4-201ENST00000257904 DHX32Q7L7V1 743 aaKnown RBP19.89■□□□□ 0.77
CDK4-201ENST00000257904 NHSL1Q5SYE7 1610 aa19.89■□□□□ 0.77
CDK4-201ENST00000257904 CCDC73Q6ZRK6 1079 aa19.88■□□□□ 0.77
CDK4-201ENST00000257904 ANKRD13DQ6ZTN6 518 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms