RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
NIP7-202ENST00000254941 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
NIP7-202ENST00000254941 VGLL2Q8N8G2 317 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 CNBD1Q8NA66 436 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 NRXN2Q9P2S2 1712 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 COL4A1P02462 1669 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 TIMM10P62072 90 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
NIP7-202ENST00000254941 CDC5LQ99459 802 aaKnown RBP11.55□□□□□ -0.56
NIP7-202ENST00000254941 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 DBNDD2Q9BQY9 259 aa11.55□□□□□ -0.56
NIP7-202ENST00000254941 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
NIP7-202ENST00000254941 MROH5Q6ZUA9 1318 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 NPHP1O15259 732 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 EIF5BO60841 1220 aaKnown RBP11.54□□□□□ -0.56
NIP7-202ENST00000254941 ATP5JP18859 108 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 BAG6P46379 1132 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 METTL24Q5JXM2 366 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 CASC1Q6TDU7 716 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 NLGN1Q8N2Q7 840 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
NIP7-202ENST00000254941 PDE8BO95263 885 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 SERPINB2P05120 415 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
NIP7-202ENST00000254941 SLC15A2Q16348 729 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
NIP7-202ENST00000254941 AKAP11Q9UKA4 1901 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
NIP7-202ENST00000254941 MFAP1P55081 439 aaKnown RBP11.53□□□□□ -0.56
NIP7-202ENST00000254941 DDR1Q08345 913 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
NIP7-202ENST00000254941 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.56
NIP7-202ENST00000254941 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
NIP7-202ENST00000254941 CHMLP26374 656 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 ANKRD18AQ8IVF6 992 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 EVI5LQ96CN4 794 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
NIP7-202ENST00000254941 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
NIP7-202ENST00000254941 ANP32AP39687 249 aaKnown RBP11.51□□□□□ -0.57
NIP7-202ENST00000254941 ST5P78524 1137 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
NIP7-202ENST00000254941 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 STK32BQ9NY57 414 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 FGFR2P21802 821 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 RPS8P62241 208 aaKnown RBP11.51□□□□□ -0.57
NIP7-202ENST00000254941 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
NIP7-202ENST00000254941 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
NIP7-202ENST00000254941 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
NIP7-202ENST00000254941 HAUS7Q99871 368 aa11.51□□□□□ -0.57
NIP7-202ENST00000254941 MYH7P12883 1935 aa11.5□□□□□ -0.57
NIP7-202ENST00000254941 ADORA1P30542 326 aa11.5□□□□□ -0.57
NIP7-202ENST00000254941 CHRNDQ07001 517 aa11.5□□□□□ -0.57
NIP7-202ENST00000254941 CCDC158Q5M9N0 1113 aa11.5□□□□□ -0.57
NIP7-202ENST00000254941 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
NIP7-202ENST00000254941 LPIN2Q92539 896 aa11.5□□□□□ -0.57
NIP7-202ENST00000254941 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
NIP7-202ENST00000254941 GORABQ5T7V8 394 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
NIP7-202ENST00000254941 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 C22orf23Q9BZE7 217 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 TAF5LO75529 589 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 REC8O95072 547 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 MMP10P09238 476 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
NIP7-202ENST00000254941 ZNF512BQ96KM6 892 aaPredicted RBP11.49□□□□□ -0.57
NIP7-202ENST00000254941 MINPP1Q9UNW1 487 aa11.49□□□□□ -0.57
NIP7-202ENST00000254941 MYO5AQ9Y4I1 1855 aaKnown RBP11.48□□□□□ -0.57
NIP7-202ENST00000254941 IFIT1P09914 478 aaKnown RBP11.48□□□□□ -0.57
NIP7-202ENST00000254941 SLC5A1P13866 664 aa11.48□□□□□ -0.57
NIP7-202ENST00000254941 TICAM2Q86XR7 235 aa11.48□□□□□ -0.57
NIP7-202ENST00000254941 HIP1O00291 1037 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 GRAPQ13588 217 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 GRAPLQ8TC17 118 aaPredicted RBP11.47□□□□□ -0.57
NIP7-202ENST00000254941 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
NIP7-202ENST00000254941 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
NIP7-202ENST00000254941 DNAJC2Q99543 621 aaKnown RBP11.47□□□□□ -0.57
NIP7-202ENST00000254941 BRIP1Q9BX63 1249 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 USP26Q9BXU7 913 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 PARP3Q9Y6F1 533 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 RFX7Q2KHR2 1363 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
NIP7-202ENST00000254941 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
NIP7-202ENST00000254941 UBE4AQ14139 1066 aa11.46□□□□□ -0.57
NIP7-202ENST00000254941 DIAPH3Q9NSV4 1193 aa11.46□□□□□ -0.57
NIP7-202ENST00000254941 PAG1Q9NWQ8 432 aa11.46□□□□□ -0.57
NIP7-202ENST00000254941 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms