RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C21orf2O43822 256 aa17.53■□□□□ 0.4
VPS25-201ENST00000253794 NEFLP07196 543 aa17.53■□□□□ 0.4
VPS25-201ENST00000253794 IL15P40933 162 aaPredicted RBP17.53■□□□□ 0.4
VPS25-201ENST00000253794 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
VPS25-201ENST00000253794 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
VPS25-201ENST00000253794 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
VPS25-201ENST00000253794 PUS3Q9BZE2 481 aaKnown RBP17.53■□□□□ 0.4
VPS25-201ENST00000253794 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
VPS25-201ENST00000253794 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.45e-6■■■□□ 14.9
VPS25-201ENST00000253794 LRRC24Q50LG9 513 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 PSMD1Q99460 953 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
VPS25-201ENST00000253794 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
VPS25-201ENST00000253794 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 XDHP47989 1333 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 CHRNDQ07001 517 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 SLC51AQ86UW1 340 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 VGLL2Q8N8G2 317 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
VPS25-201ENST00000253794 CNNM1Q9NRU3 951 aa17.51■□□□□ 0.39
VPS25-201ENST00000253794 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
VPS25-201ENST00000253794 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
VPS25-201ENST00000253794 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
VPS25-201ENST00000253794 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
VPS25-201ENST00000253794 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
VPS25-201ENST00000253794 GPSM2P81274 684 aa17.49■□□□□ 0.39
VPS25-201ENST00000253794 MPNDQ8N594 471 aa17.49■□□□□ 0.39
VPS25-201ENST00000253794 SIL1Q9H173 461 aa17.49■□□□□ 0.39
VPS25-201ENST00000253794 LEMD3Q9Y2U8 911 aa17.49■□□□□ 0.39
VPS25-201ENST00000253794 UTRNP46939 3433 aa17.49■□□□□ 0.39
VPS25-201ENST00000253794 NFKBIEO00221 500 aa17.48■□□□□ 0.39
VPS25-201ENST00000253794 GRIN3BO60391 1043 aa17.48■□□□□ 0.39
VPS25-201ENST00000253794 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
VPS25-201ENST00000253794 PDE8BO95263 885 aa17.48■□□□□ 0.39
VPS25-201ENST00000253794 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
VPS25-201ENST00000253794 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.398e-8■■□□□ 13.7
VPS25-201ENST00000253794 VPS33BQ9H267 617 aa17.48■□□□□ 0.39
VPS25-201ENST00000253794 SASH1O94885 1247 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 DPP8Q6V1X1 898 aaPredicted RBP17.47■□□□□ 0.39
VPS25-201ENST00000253794 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
VPS25-201ENST00000253794 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
VPS25-201ENST00000253794 GPR108Q9NPR9 543 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
VPS25-201ENST00000253794 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
VPS25-201ENST00000253794 FGFR2P21802 821 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 UBE4AQ14139 1066 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 GPR162Q16538 588 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 SUPT20HQ8NEM7 779 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 TAOK3Q9H2K8 898 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 ANKIB1Q9P2G1 1089 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
VPS25-201ENST00000253794 POLLQ9UGP5 575 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 GGA1Q9UJY5 639 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
VPS25-201ENST00000253794 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
VPS25-201ENST00000253794 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
VPS25-201ENST00000253794 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
VPS25-201ENST00000253794 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
VPS25-201ENST00000253794 TAF5LO75529 589 aa17.44■□□□□ 0.38
VPS25-201ENST00000253794 TFCP2Q12800 502 aa17.44■□□□□ 0.38
VPS25-201ENST00000253794 PUM3Q15397 648 aaKnown RBP17.44■□□□□ 0.38
VPS25-201ENST00000253794 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
VPS25-201ENST00000253794 KIF1BPQ96EK5 621 aa17.44■□□□□ 0.38
VPS25-201ENST00000253794 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
VPS25-201ENST00000253794 ZBTB22O15209 634 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 UFL1O94874 794 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 IGHDP01880 384 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
VPS25-201ENST00000253794 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 LPIN2Q92539 896 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 EYA3Q99504 573 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 ZNF609O15014 1411 aa17.43■□□□□ 0.38
VPS25-201ENST00000253794 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
VPS25-201ENST00000253794 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
VPS25-201ENST00000253794 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
VPS25-201ENST00000253794 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
VPS25-201ENST00000253794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
VPS25-201ENST00000253794 WTIPA6NIX2 430 aaPredicted RBP17.41■□□□□ 0.38
VPS25-201ENST00000253794 PRELPP51888 382 aa17.41■□□□□ 0.38
VPS25-201ENST00000253794 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
VPS25-201ENST00000253794 LRRCC1Q9C099 1032 aa17.41■□□□□ 0.38
VPS25-201ENST00000253794 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 SNAP23O00161 211 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 LMNB1P20700 586 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 IARSP41252 1262 aaKnown RBP17.4■□□□□ 0.38
VPS25-201ENST00000253794 KCNJ4P48050 445 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 RASSF7Q02833 373 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms