RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 MSH5O43196 834 aa22.76■■□□□ 1.23
TNFSF9-201ENST00000245817 GYS1P13807 737 aa22.76■■□□□ 1.23
TNFSF9-201ENST00000245817 CCDC158Q5M9N0 1113 aa22.76■■□□□ 1.23
TNFSF9-201ENST00000245817 ZNF609O15014 1411 aa22.75■■□□□ 1.23
TNFSF9-201ENST00000245817 ATP2B3Q16720 1220 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 ANKRD18AQ8IVF6 992 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 CNBD1Q8NA66 436 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 ESYT1Q9BSJ8 1104 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 DAXXQ9UER7 740 aaPredicted RBP22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 C4AP0C0L4 1744 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 UBR3Q6ZT12 1888 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 HIP1O00291 1037 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 DIAPH3Q9NSV4 1193 aa22.74■■□□□ 1.23
TNFSF9-201ENST00000245817 DDX60Q8IY21 1712 aaKnown RBP22.73■■□□□ 1.23
TNFSF9-201ENST00000245817 PDE8BO95263 885 aa22.73■■□□□ 1.23
TNFSF9-201ENST00000245817 RBM25P49756 843 aaKnown RBP22.73■■□□□ 1.23
TNFSF9-201ENST00000245817 RUFY2Q8WXA3 655 aa22.73■■□□□ 1.23
TNFSF9-201ENST00000245817 LAMB2P55268 1798 aa22.72■■□□□ 1.23
TNFSF9-201ENST00000245817 TTC39AQ5SRH9 613 aa22.72■■□□□ 1.23
TNFSF9-201ENST00000245817 XAGE2Q96GT9 111 aa22.72■■□□□ 1.23
TNFSF9-201ENST00000245817 ABCC12Q96J65 1359 aa22.72■■□□□ 1.23
TNFSF9-201ENST00000245817 DNAJC2Q99543 621 aaKnown RBP22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 HAUS7Q99871 368 aa22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 FSD1Q9BTV5 496 aa22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 ST5P78524 1137 aa22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 PUM3Q15397 648 aaKnown RBP22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 C3orf67Q6ZVT6 689 aa22.71■■□□□ 1.23
TNFSF9-201ENST00000245817 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 SERPINB2P05120 415 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 IFIT1P09914 478 aaKnown RBP22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 CCDC24Q8N4L8 307 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 USP26Q9BXU7 913 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.22
TNFSF9-201ENST00000245817 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 TM4SF1P30408 202 aa22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 NLGN1Q8N2Q7 840 aa22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 LPIN2Q92539 896 aa22.69■■□□□ 1.22
TNFSF9-201ENST00000245817 SLC5A1P13866 664 aa22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 R3HDM1Q15032 1099 aaKnown RBP22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 CWC27Q6UX04 472 aaKnown RBP22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 COL23A1Q86Y22 540 aaPredicted RBP22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 ANO2Q9NQ90 1003 aa22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 BSDC1Q9NW68 430 aaPredicted RBP22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 ADORA1P30542 326 aa22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 BECN1Q14457 450 aa22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
TNFSF9-201ENST00000245817 MCCP23508 829 aa22.67■■□□□ 1.22
TNFSF9-201ENST00000245817 PRR5LQ6MZQ0 368 aa22.67■■□□□ 1.22
TNFSF9-201ENST00000245817 RPS8P62241 208 aaKnown RBP22.66■■□□□ 1.22
TNFSF9-201ENST00000245817 CHRNDQ07001 517 aa22.66■■□□□ 1.22
TNFSF9-201ENST00000245817 PAG1Q9NWQ8 432 aa22.66■■□□□ 1.22
TNFSF9-201ENST00000245817 LRP5O75197 1615 aa22.66■■□□□ 1.22
TNFSF9-201ENST00000245817 SGSM2O43147 1006 aa22.65■■□□□ 1.22
TNFSF9-201ENST00000245817 TAF5LO75529 589 aa22.65■■□□□ 1.22
TNFSF9-201ENST00000245817 QSER1Q2KHR3 1735 aa22.65■■□□□ 1.22
TNFSF9-201ENST00000245817 AK9Q5TCS8 1911 aa22.65■■□□□ 1.22
TNFSF9-201ENST00000245817 EPB41L2O43491 1005 aaKnown RBP22.65■■□□□ 1.22
TNFSF9-201ENST00000245817 GOLIM4O00461 696 aa22.64■■□□□ 1.21
TNFSF9-201ENST00000245817 FGFR2P21802 821 aa22.64■■□□□ 1.21
TNFSF9-201ENST00000245817 FKBP4Q02790 459 aaKnown RBP eCLIP22.64■■□□□ 1.21
TNFSF9-201ENST00000245817 CELF1Q92879 486 aaKnown RBP22.64■■□□□ 1.21
TNFSF9-201ENST00000245817 EDC3Q96F86 508 aaKnown RBP22.64■■□□□ 1.21
TNFSF9-201ENST00000245817 PSDA5PKW4 1024 aaPredicted RBP22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 POLRMTO00411 1230 aaKnown RBP22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 UQCRFS1P1P0C7P4 283 aa22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 LRRFIP1Q32MZ4 808 aaKnown RBP22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 TICAM2Q86XR7 235 aa22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 RPGRQ92834 1020 aaKnown RBP22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 NDUFB9Q9Y6M9 179 aa22.63■■□□□ 1.21
TNFSF9-201ENST00000245817 KBTBD3Q8NAB2 608 aa22.62■■□□□ 1.21
TNFSF9-201ENST00000245817 ZNF512BQ96KM6 892 aaPredicted RBP22.62■■□□□ 1.21
TNFSF9-201ENST00000245817 RFX7Q2KHR2 1363 aa22.62■■□□□ 1.21
TNFSF9-201ENST00000245817 DDR1Q08345 913 aa22.62■■□□□ 1.21
TNFSF9-201ENST00000245817 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
TNFSF9-201ENST00000245817 RAD50Q92878 1312 aa22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 NMIQ13287 307 aaPredicted RBP22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 CCDC102BQ68D86 513 aa22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 SLC16A10Q8TF71 515 aa22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 PDGFDQ9GZP0 370 aaPredicted RBP22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 ANKRD2Q9GZV1 360 aa22.61■■□□□ 1.21
TNFSF9-201ENST00000245817 PARP3Q9Y6F1 533 aa22.6■■□□□ 1.21
TNFSF9-201ENST00000245817 KCNJ4P48050 445 aa22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 GRAPQ13588 217 aa22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 UBE4AQ14139 1066 aa22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 ERICH6Q7L0X2 663 aa22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 GRAPLQ8TC17 118 aaPredicted RBP22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 RBM17Q96I25 401 aaKnown RBP22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 SNRKQ9NRH2 765 aa22.59■■□□□ 1.21
TNFSF9-201ENST00000245817 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
TNFSF9-201ENST00000245817 TTF1Q15361 905 aaPredicted RBP22.58■■□□□ 1.2
TNFSF9-201ENST00000245817 IL25Q9H293 177 aa22.58■■□□□ 1.2
TNFSF9-201ENST00000245817 ARID4AP29374 1257 aaPredicted RBP22.57■■□□□ 1.2
TNFSF9-201ENST00000245817 ZAP70P43403 619 aa22.57■■□□□ 1.2
TNFSF9-201ENST00000245817 PHKA1P46020 1223 aa22.57■■□□□ 1.2
TNFSF9-201ENST00000245817 SNAP23O00161 211 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms