RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GGA3Q9NZ52 723 aa18.01■□□□□ 0.47
DDX39A-201ENST00000242776 G3V3G9 751 aa18.01■□□□□ 0.47
DDX39A-201ENST00000242776 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
DDX39A-201ENST00000242776 CCDC102AQ96A19 550 aa18.01■□□□□ 0.47
DDX39A-201ENST00000242776 SCAF8Q9UPN6 1271 aaKnown RBP18.01■□□□□ 0.47
DDX39A-201ENST00000242776 TMC4Q7Z404 712 aa18■□□□□ 0.47
DDX39A-201ENST00000242776 SULF1Q8IWU6 871 aa18■□□□□ 0.47
DDX39A-201ENST00000242776 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
DDX39A-201ENST00000242776 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
DDX39A-201ENST00000242776 CDCA5Q96FF9 252 aa17.99■□□□□ 0.47
DDX39A-201ENST00000242776 EYA3Q99504 573 aa17.99■□□□□ 0.47
DDX39A-201ENST00000242776 SLC10A3P09131 477 aa17.98■□□□□ 0.47
DDX39A-201ENST00000242776 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
DDX39A-201ENST00000242776 CSRNP1Q96S65 589 aa17.98■□□□□ 0.47
DDX39A-201ENST00000242776 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
DDX39A-201ENST00000242776 RPS12P25398 132 aaKnown RBP17.97■□□□□ 0.47
DDX39A-201ENST00000242776 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
DDX39A-201ENST00000242776 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
DDX39A-201ENST00000242776 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-201ENST00000242776 UFL1O94874 794 aa17.96■□□□□ 0.47
DDX39A-201ENST00000242776 SF3B3Q15393 1217 aaKnown RBP17.96■□□□□ 0.47
DDX39A-201ENST00000242776 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
DDX39A-201ENST00000242776 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
DDX39A-201ENST00000242776 MOB2Q70IA6 237 aa17.96■□□□□ 0.47
DDX39A-201ENST00000242776 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-201ENST00000242776 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
DDX39A-201ENST00000242776 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
DDX39A-201ENST00000242776 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
DDX39A-201ENST00000242776 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
DDX39A-201ENST00000242776 SCARF1Q14162 830 aa17.95■□□□□ 0.46
DDX39A-201ENST00000242776 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-201ENST00000242776 ANKIB1Q9P2G1 1089 aa17.95■□□□□ 0.46
DDX39A-201ENST00000242776 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
DDX39A-201ENST00000242776 CTU1Q7Z7A3 348 aaKnown RBP17.95■□□□□ 0.46
DDX39A-201ENST00000242776 RASAL3Q86YV0 1011 aa17.95■□□□□ 0.46
DDX39A-201ENST00000242776 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
DDX39A-201ENST00000242776 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
DDX39A-201ENST00000242776 PRAMEF18Q5VWM3 479 aa17.94■□□□□ 0.46
DDX39A-201ENST00000242776 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
DDX39A-201ENST00000242776 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
DDX39A-201ENST00000242776 MKRN3Q13064 507 aaKnown RBP17.93■□□□□ 0.46
DDX39A-201ENST00000242776 CHL1O00533 1208 aa17.92■□□□□ 0.46
DDX39A-201ENST00000242776 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
DDX39A-201ENST00000242776 HDAC9Q9UKV0 1011 aa17.92■□□□□ 0.46
DDX39A-201ENST00000242776 SPEF2Q9C093 1822 aa17.92■□□□□ 0.46
DDX39A-201ENST00000242776 PSME4Q14997 1843 aa17.91■□□□□ 0.46
DDX39A-201ENST00000242776 UBE2Q2LH0YL09 131 aa17.91■□□□□ 0.46
DDX39A-201ENST00000242776 TTLL12Q14166 644 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-201ENST00000242776 RSBN1LQ6PCB5 846 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-201ENST00000242776 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
DDX39A-201ENST00000242776 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-201ENST00000242776 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-201ENST00000242776 HPS5Q9UPZ3 1129 aa17.91■□□□□ 0.46
DDX39A-201ENST00000242776 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
DDX39A-201ENST00000242776 MYD88Q99836 296 aa17.9■□□□□ 0.46
DDX39A-201ENST00000242776 PAPPA2Q9BXP8 1791 aa17.89■□□□□ 0.46
DDX39A-201ENST00000242776 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
DDX39A-201ENST00000242776 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
DDX39A-201ENST00000242776 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
DDX39A-201ENST00000242776 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 MXD3Q9BW11 206 aa17.88■□□□□ 0.45
DDX39A-201ENST00000242776 PHAXQ9H814 394 aaKnown RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 HYPKQ9NX55 129 aa17.88■□□□□ 0.45
DDX39A-201ENST00000242776 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
DDX39A-201ENST00000242776 ZNF280AP59817 542 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 PRKG1Q13976 671 aa17.88■□□□□ 0.45
DDX39A-201ENST00000242776 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 ZNF296Q8WUU4 475 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-201ENST00000242776 PODXL2Q9NZ53 605 aa17.88■□□□□ 0.45
DDX39A-201ENST00000242776 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
DDX39A-201ENST00000242776 AGBL3Q8NEM8 1001 aa17.87■□□□□ 0.45
DDX39A-201ENST00000242776 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
DDX39A-201ENST00000242776 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
DDX39A-201ENST00000242776 PRPF38BQ5VTL8 546 aaKnown RBP17.86■□□□□ 0.45
DDX39A-201ENST00000242776 USP17L3A6NCW0 530 aa17.85■□□□□ 0.45
DDX39A-201ENST00000242776 USP17L4A6NCW7 530 aa17.85■□□□□ 0.45
DDX39A-201ENST00000242776 USP17L1Q7RTZ2 530 aa17.85■□□□□ 0.45
DDX39A-201ENST00000242776 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
DDX39A-201ENST00000242776 XDHP47989 1333 aa17.84■□□□□ 0.45
DDX39A-201ENST00000242776 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-201ENST00000242776 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
DDX39A-201ENST00000242776 GMLQ99445 158 aa17.84■□□□□ 0.45
DDX39A-201ENST00000242776 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
DDX39A-201ENST00000242776 PDE8AO60658 829 aa17.83■□□□□ 0.45
DDX39A-201ENST00000242776 FKBP1BP68106 108 aa17.83■□□□□ 0.45
DDX39A-201ENST00000242776 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.45
DDX39A-201ENST00000242776 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.45
DDX39A-201ENST00000242776 ANP32CO43423 234 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 SASH1O94885 1247 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 HOXB7P09629 217 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 ATP2B4P23634 1241 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 GPR25O00155 361 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-201ENST00000242776 R3HDMLQ9H3Y0 253 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 CWC25Q9NXE8 425 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-201ENST00000242776 FZD1Q9UP38 647 aa17.82■□□□□ 0.44
DDX39A-201ENST00000242776 RALBP1Q15311 655 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms