RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 ZSCAN22P10073 491 aaPredicted RBP23.53■■□□□ 1.36
RTKN-201ENST00000233330 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
RTKN-201ENST00000233330 HELLSQ9NRZ9 838 aa23.53■■□□□ 1.36
RTKN-201ENST00000233330 AKAP2Q9Y2D5 859 aa23.53■■□□□ 1.36
RTKN-201ENST00000233330 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
RTKN-201ENST00000233330 GJB2P29033 226 aa23.53■■□□□ 1.36
RTKN-201ENST00000233330 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
RTKN-201ENST00000233330 MBD3O95983 291 aa23.52■■□□□ 1.36
RTKN-201ENST00000233330 TAF7LQ5H9L4 462 aa23.52■■□□□ 1.36
RTKN-201ENST00000233330 DDB1Q16531 1140 aa23.52■■□□□ 1.36
RTKN-201ENST00000233330 TCEANC2Q96MN5 208 aa23.52■■□□□ 1.36
RTKN-201ENST00000233330 NSFL1CQ9UNZ2 370 aaKnown RBP23.52■■□□□ 1.36
RTKN-201ENST00000233330 RIC1Q4ADV7 1423 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 ERVV-1B6SEH8 477 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 TOB2Q14106 344 aaPredicted RBP23.51■■□□□ 1.35
RTKN-201ENST00000233330 ZMYM1Q5SVZ6 1142 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 NECAB1Q8N987 351 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 TTLL11Q8NHH1 800 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 LAMA4Q16363 1823 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 FOXD4L6Q3SYB3 417 aaPredicted RBP23.51■■□□□ 1.35
RTKN-201ENST00000233330 FOXD4L3Q6VB84 417 aaPredicted RBP23.51■■□□□ 1.35
RTKN-201ENST00000233330 XAGE2Q96GT9 111 aa23.51■■□□□ 1.35
RTKN-201ENST00000233330 RTN4Q9NQC3 1192 aaKnown RBP23.51■■□□□ 1.35
RTKN-201ENST00000233330 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
RTKN-201ENST00000233330 CYP21A2P08686 494 aa23.5■■□□□ 1.35
RTKN-201ENST00000233330 ADORA1P30542 326 aa23.5■■□□□ 1.35
RTKN-201ENST00000233330 CTSWP56202 376 aa23.5■■□□□ 1.35
RTKN-201ENST00000233330 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
RTKN-201ENST00000233330 CCDC158Q5M9N0 1113 aa23.5■■□□□ 1.35
RTKN-201ENST00000233330 DZIP3Q86Y13 1208 aaKnown RBP23.5■■□□□ 1.35
RTKN-201ENST00000233330 NEK1Q96PY6 1258 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 GREM2Q9H772 168 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 TMEM63CQ9P1W3 806 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 NWD2Q9ULI1 1742 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 F13A1P00488 732 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 ITGA6P23229 1130 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 TBC1D2BQ9UPU7 963 aa23.49■■□□□ 1.35
RTKN-201ENST00000233330 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
RTKN-201ENST00000233330 DSCC1Q9BVC3 393 aa23.48■■□□□ 1.35
RTKN-201ENST00000233330 TRMT112Q9UI30 125 aaKnown RBP23.48■■□□□ 1.35
RTKN-201ENST00000233330 RIPOR2Q9Y4F9 1068 aa23.48■■□□□ 1.35
RTKN-201ENST00000233330 RNF113AO15541 343 aaKnown RBP23.48■■□□□ 1.35
RTKN-201ENST00000233330 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
RTKN-201ENST00000233330 TMEM87AQ8NBN3 555 aa23.48■■□□□ 1.35
RTKN-201ENST00000233330 GDPD2Q9HCC8 539 aa23.48■■□□□ 1.35
RTKN-201ENST00000233330 UBN2Q6ZU65 1347 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 GORABQ5T7V8 394 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 MTMR6Q9Y217 621 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 RREB1Q92766 1687 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 MAST3O60307 1309 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 MYH7P12883 1935 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
RTKN-201ENST00000233330 CICQ96RK0 1608 aaPredicted RBP23.47■■□□□ 1.35
RTKN-201ENST00000233330 SLIT2O94813 1529 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 ANKRD18BA2A2Z9 1011 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 DTNBO60941 627 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 EIF5P55010 431 aaKnown RBP23.46■■□□□ 1.35
RTKN-201ENST00000233330 FKBP4Q02790 459 aaKnown RBP eCLIP23.46■■□□□ 1.35
RTKN-201ENST00000233330 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 ZNF34Q8IZ26 560 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 MARCH10Q8NA82 808 aaPredicted RBP23.46■■□□□ 1.35
RTKN-201ENST00000233330 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
RTKN-201ENST00000233330 ATP6V1DQ9Y5K8 247 aa23.45■■□□□ 1.35
RTKN-201ENST00000233330 ABCC12Q96J65 1359 aa23.45■■□□□ 1.34
RTKN-201ENST00000233330 PDE8AO60658 829 aa23.45■■□□□ 1.34
RTKN-201ENST00000233330 METTL24Q5JXM2 366 aa23.45■■□□□ 1.34
RTKN-201ENST00000233330 INTS5Q6P9B9 1019 aaKnown RBP23.45■■□□□ 1.34
RTKN-201ENST00000233330 AKAP11Q9UKA4 1901 aa23.45■■□□□ 1.34
RTKN-201ENST00000233330 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
RTKN-201ENST00000233330 ATP2B3Q16720 1220 aa23.44■■□□□ 1.34
RTKN-201ENST00000233330 ACSBG1Q96GR2 724 aa23.44■■□□□ 1.34
RTKN-201ENST00000233330 SCARF1Q14162 830 aa23.44■■□□□ 1.34
RTKN-201ENST00000233330 STOX1Q6ZVD7 989 aa23.44■■□□□ 1.34
RTKN-201ENST00000233330 CNPY2Q9Y2B0 182 aa23.44■■□□□ 1.34
RTKN-201ENST00000233330 LRP5O75197 1615 aa23.43■■□□□ 1.34
RTKN-201ENST00000233330 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
RTKN-201ENST00000233330 GADD45BO75293 160 aaPredicted RBP23.43■■□□□ 1.34
RTKN-201ENST00000233330 FAM43AQ8N2R8 423 aa23.43■■□□□ 1.34
RTKN-201ENST00000233330 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
RTKN-201ENST00000233330 NASPP49321 788 aaPredicted RBP23.43■■□□□ 1.34
RTKN-201ENST00000233330 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
RTKN-201ENST00000233330 VGLL2Q8N8G2 317 aa23.43■■□□□ 1.34
RTKN-201ENST00000233330 A0A0G2JS52 829 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
RTKN-201ENST00000233330 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
RTKN-201ENST00000233330 M0R2C6 588 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 PDIA4P13667 645 aaKnown RBP23.42■■□□□ 1.34
RTKN-201ENST00000233330 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 Q6ZUG5 572 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
RTKN-201ENST00000233330 OSBP2Q969R2 916 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 CNNM1Q9NRU3 951 aa23.42■■□□□ 1.34
RTKN-201ENST00000233330 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
RTKN-201ENST00000233330 CRKLP46109 303 aaKnown RBP23.41■■□□□ 1.34
RTKN-201ENST00000233330 SIK1P57059 783 aa23.41■■□□□ 1.34
RTKN-201ENST00000233330 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
RTKN-201ENST00000233330 ZFYP08048 801 aaPredicted RBP23.41■■□□□ 1.34
RTKN-201ENST00000233330 HMGB1P09429 215 aaKnown RBP23.41■■□□□ 1.34
RTKN-201ENST00000233330 LRSAM1Q6UWE0 723 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms