RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RTN1Q16799 776 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
NEK4-201ENST00000233027 ARFGAP3Q9NP61 516 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
NEK4-201ENST00000233027 SBNO2Q9Y2G9 1366 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 APOBRQ0VD83 1088 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 CAPZA3Q96KX2 299 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 IGSF3O75054 1194 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
NEK4-201ENST00000233027 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 HEATR3Q7Z4Q2 680 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 CTAGE1Q96RT6 745 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 SAMM50Q9Y512 469 aa15.28■□□□□ 0.04
NEK4-201ENST00000233027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEK4-201ENST00000233027 CETN1Q12798 172 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 SMC5Q8IY18 1101 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 COPS6Q7L5N1 327 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 STX8Q9UNK0 236 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 CYP7A1P22680 504 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 KRT23Q9C075 422 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 EHMT1Q9H9B1 1298 aa15.27■□□□□ 0.04
NEK4-201ENST00000233027 SLU7O95391 586 aaKnown RBP15.27■□□□□ 0.03
NEK4-201ENST00000233027 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.03
NEK4-201ENST00000233027 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.03
NEK4-201ENST00000233027 FERMT2Q96AC1 680 aa15.27■□□□□ 0.03
NEK4-201ENST00000233027 GRM8O00222 908 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 CYLC1P35663 651 aaPredicted RBP15.26■□□□□ 0.03
NEK4-201ENST00000233027 TERF1P54274 439 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 SLF2Q8IX21 1173 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 PARD3Q8TEW0 1356 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 STX17P56962 302 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 NF2P35240 595 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 SPTLC2O15270 562 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 TSPY3P0CV98 308 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 TSPY8P0CW00 308 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 CREB3L3Q68CJ9 461 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 SYT10Q6XYQ8 523 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 PLEKHM2Q8IWE5 1019 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 CPA1P15085 419 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 CCDC97Q96F63 343 aaPredicted RBP15.26■□□□□ 0.03
NEK4-201ENST00000233027 CRNKL1Q9BZJ0 848 aaKnown RBP15.26■□□□□ 0.03
NEK4-201ENST00000233027 LZTFL1Q9NQ48 299 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 IFNKQ9P0W0 207 aa15.26■□□□□ 0.03
NEK4-201ENST00000233027 RXRAP19793 462 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 ARID5AQ03989 594 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 CTAGE9A4FU28 777 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 UQCRFS1P1P0C7P4 283 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 SPECC1LQ69YQ0 1117 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 PAG1Q9NWQ8 432 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 MNAT1P51948 309 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 BAG3O95817 575 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 PAIP2Q9BPZ3 127 aaKnown RBP15.25■□□□□ 0.03
NEK4-201ENST00000233027 TBCAO75347 108 aaKnown RBP15.25■□□□□ 0.03
NEK4-201ENST00000233027 GOLGA1Q92805 767 aa15.25■□□□□ 0.03
NEK4-201ENST00000233027 PPIP5K1Q6PFW1 1433 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 RGS22Q8NE09 1264 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 SLC9C2Q5TAH2 1124 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
NEK4-201ENST00000233027 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 SERPINA10Q9UK55 444 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 EXOC5O00471 708 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 ASIC1P78348 528 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 VPS18Q9P253 973 aa15.24■□□□□ 0.03
NEK4-201ENST00000233027 RHOXF2BP0C7M4 288 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 RHOXF2Q9BQY4 288 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 IFI16Q16666 785 aaKnown RBP15.23■□□□□ 0.03
NEK4-201ENST00000233027 MTHFSDQ2M296 383 aaKnown RBP15.23■□□□□ 0.03
NEK4-201ENST00000233027 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
NEK4-201ENST00000233027 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 STAMBPO95630 424 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 CEP63Q96MT8 703 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 MSH6P52701 1360 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 A0A1W2PRG0 241 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 TMEM110-MUSTN1A8MSY1 372 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 BICD1Q96G01 975 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 ZFYP08048 801 aaPredicted RBP15.23■□□□□ 0.03
NEK4-201ENST00000233027 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 ESR2Q92731 530 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 RBSNQ9H1K0 784 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 ZBTB40Q9NUA8 1239 aa15.23■□□□□ 0.03
NEK4-201ENST00000233027 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
NEK4-201ENST00000233027 ZNF569Q5MCW4 686 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 CCDC94Q9BW85 323 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms