RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 BLOC1S2Q6QNY1 142 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 CCDC83Q8IWF9 413 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 KLHL34Q8N239 644 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 LARP6Q9BRS8 491 aaKnown RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 NWD2Q9ULI1 1742 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 LETM1O95202 739 aaPredicted RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 PDIA4P13667 645 aaKnown RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 KRT32Q14532 448 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 UVSSAQ2YD98 709 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 USPL1Q5W0Q7 1092 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 ZNF589Q86UQ0 364 aaPredicted RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 EDC3Q96F86 508 aaKnown RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 FBXO3Q9UK99 471 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 HSP90AB3PQ58FF7 597 aa26.41■■□□□ 1.82
CCDC9-201ENST00000221922 ZBTB38Q8NAP3 1195 aaPredicted RBP26.41■■□□□ 1.82
CCDC9-201ENST00000221922 DNAJC2Q99543 621 aaKnown RBP26.41■■□□□ 1.82
CCDC9-201ENST00000221922 UBE2Q2Q8WVN8 375 aa26.4■■□□□ 1.82
CCDC9-201ENST00000221922 CDHR2Q9BYE9 1310 aa26.39■■□□□ 1.82
CCDC9-201ENST00000221922 ADAMTS2O95450 1211 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 RPS6KB1P23443 525 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 GJB2P29033 226 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 KBTBD3Q8NAB2 608 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 SYTL4Q96C24 671 aaPredicted RBP26.38■■□□□ 1.81
CCDC9-201ENST00000221922 U3KPZ7 1027 aaPredicted RBP26.38■■□□□ 1.81
CCDC9-201ENST00000221922 SPEF2Q9C093 1822 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 PALLDQ8WX93 1383 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 ME3Q16798 604 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 CCDC57Q2TAC2 916 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 MCMDC2Q4G0Z9 681 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 LRRC24Q50LG9 513 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 MTMR6Q9Y217 621 aa26.38■■□□□ 1.81
CCDC9-201ENST00000221922 CSF1RP07333 972 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 ZNF594Q96JF6 807 aaPredicted RBP26.37■■□□□ 1.81
CCDC9-201ENST00000221922 KAT6BQ8WYB5 2073 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 SH3TC1Q8TE82 1336 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 DDB1Q16531 1140 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 ZBTB1Q9Y2K1 713 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 NUP98P52948 1817 aa26.37■■□□□ 1.81
CCDC9-201ENST00000221922 CICQ96RK0 1608 aaPredicted RBP26.36■■□□□ 1.81
CCDC9-201ENST00000221922 IL6STP40189 918 aaPredicted RBP26.36■■□□□ 1.81
CCDC9-201ENST00000221922 ST3GAL1Q11201 340 aa26.36■■□□□ 1.81
CCDC9-201ENST00000221922 HSP90AA2PQ14568 343 aaPredicted RBP26.36■■□□□ 1.81
CCDC9-201ENST00000221922 CSPP1Q1MSJ5 1256 aa26.36■■□□□ 1.81
CCDC9-201ENST00000221922 NLRP10Q86W26 655 aa26.36■■□□□ 1.81
CCDC9-201ENST00000221922 NEUROD6Q96NK8 337 aa26.36■■□□□ 1.81
CCDC9-201ENST00000221922 TPCN1Q9ULQ1 816 aa26.36■■□□□ 1.81
CCDC9-201ENST00000221922 HLFQ16534 295 aa26.35■■□□□ 1.81
CCDC9-201ENST00000221922 FAM89AQ96GI7 184 aa26.35■■□□□ 1.81
CCDC9-201ENST00000221922 ERVV-1B6SEH8 477 aa26.35■■□□□ 1.81
CCDC9-201ENST00000221922 DDX46Q7L014 1031 aaKnown RBP26.35■■□□□ 1.81
CCDC9-201ENST00000221922 SPATA31A5Q5VU36 1347 aa26.35■■□□□ 1.81
CCDC9-201ENST00000221922 SPATA31A7Q8IWB4 1347 aa26.35■■□□□ 1.81
CCDC9-201ENST00000221922 PAG1Q9NWQ8 432 aa26.34■■□□□ 1.81
CCDC9-201ENST00000221922 MYH3P11055 1940 aa26.34■■□□□ 1.81
CCDC9-201ENST00000221922 SLIT2O94813 1529 aa26.34■■□□□ 1.81
CCDC9-201ENST00000221922 PUS3Q9BZE2 481 aaKnown RBP26.34■■□□□ 1.81
CCDC9-201ENST00000221922 TIMM10P62072 90 aa26.33■■□□□ 1.81
CCDC9-201ENST00000221922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.33■■□□□ 1.81
CCDC9-201ENST00000221922 HELLSQ9NRZ9 838 aa26.33■■□□□ 1.81
CCDC9-201ENST00000221922 CEP126Q9P2H0 1117 aa26.33■■□□□ 1.81
CCDC9-201ENST00000221922 NDUFB9Q9Y6M9 179 aa26.33■■□□□ 1.81
CCDC9-201ENST00000221922 RREB1Q92766 1687 aa26.33■■□□□ 1.81
CCDC9-201ENST00000221922 A0A1B0GUL7 405 aa26.32■■□□□ 1.8
CCDC9-201ENST00000221922 PDCP20941 246 aa26.32■■□□□ 1.8
CCDC9-201ENST00000221922 FIBPO43427 364 aa26.32■■□□□ 1.8
CCDC9-201ENST00000221922 BARGINQ6ZT62 677 aa26.32■■□□□ 1.8
CCDC9-201ENST00000221922 IFIT5Q13325 482 aaKnown RBP26.31■■□□□ 1.8
CCDC9-201ENST00000221922 NECAB1Q8N987 351 aa26.31■■□□□ 1.8
CCDC9-201ENST00000221922 AKAP2Q9Y2D5 859 aa26.31■■□□□ 1.8
CCDC9-201ENST00000221922 DNM1Q05193 864 aaKnown RBP26.3■■□□□ 1.8
CCDC9-201ENST00000221922 NEK1Q96PY6 1258 aa26.3■■□□□ 1.8
CCDC9-201ENST00000221922 GOLIM4O00461 696 aa26.3■■□□□ 1.8
CCDC9-201ENST00000221922 GPTP24298 496 aa26.3■■□□□ 1.8
CCDC9-201ENST00000221922 TOB2Q14106 344 aaPredicted RBP26.3■■□□□ 1.8
CCDC9-201ENST00000221922 FUCA2Q9BTY2 467 aa26.3■■□□□ 1.8
CCDC9-201ENST00000221922 DZIP3Q86Y13 1208 aaKnown RBP26.29■■□□□ 1.8
CCDC9-201ENST00000221922 TAF6LQ9Y6J9 622 aa26.29■■□□□ 1.8
CCDC9-201ENST00000221922 PTMAP06454 111 aaKnown RBP26.29■■□□□ 1.8
CCDC9-201ENST00000221922 IFIT1P09914 478 aaKnown RBP26.29■■□□□ 1.8
CCDC9-201ENST00000221922 CCDC129Q6ZRS4 1044 aa26.29■■□□□ 1.8
CCDC9-201ENST00000221922 MARCH10Q8NA82 808 aaPredicted RBP26.29■■□□□ 1.8
CCDC9-201ENST00000221922 R3HCC1Q9Y3T6 440 aaKnown RBP26.29■■□□□ 1.8
CCDC9-201ENST00000221922 SEC62Q99442 399 aaKnown RBP26.28■■□□□ 1.8
CCDC9-201ENST00000221922 CCDC9Q9Y3X0 531 aaKnown RBP26.28■■□□□ 1.8
CCDC9-201ENST00000221922 TOM1O60784 492 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 CTSWP56202 376 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 TAF7LQ5H9L4 462 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 LARP1BQ659C4 914 aaKnown RBP26.27■■□□□ 1.8
CCDC9-201ENST00000221922 TTLL11Q8NHH1 800 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 DSCC1Q9BVC3 393 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.27■■□□□ 1.8
CCDC9-201ENST00000221922 RIC1Q4ADV7 1423 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 HCLS1P14317 486 aaPredicted RBP26.27■■□□□ 1.8
CCDC9-201ENST00000221922 LRRFIP1Q32MZ4 808 aaKnown RBP26.27■■□□□ 1.8
CCDC9-201ENST00000221922 ZMYM1Q5SVZ6 1142 aa26.27■■□□□ 1.8
CCDC9-201ENST00000221922 VPS37CA5D8V6 355 aaPredicted RBP26.26■■□□□ 1.79
CCDC9-201ENST00000221922 NUTM2BA6NNL0 878 aaPredicted RBP26.26■■□□□ 1.79
CCDC9-201ENST00000221922 NUTM2EB1AL46 878 aaPredicted RBP26.26■■□□□ 1.79
CCDC9-201ENST00000221922 HMGB1P09429 215 aaKnown RBP26.26■■□□□ 1.79
CCDC9-201ENST00000221922 EIF5P55010 431 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms