RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TMX4Q9H1E5 349 aaPredicted RBP29.48■■■□□ 2.31
HOMER3-201ENST00000221222 LTBP1Q14766 1721 aa29.47■■■□□ 2.31
HOMER3-201ENST00000221222 TAF7LQ5H9L4 462 aa29.47■■■□□ 2.31
HOMER3-201ENST00000221222 ZNF594Q96JF6 807 aaPredicted RBP29.47■■■□□ 2.31
HOMER3-201ENST00000221222 SRGAP3O43295 1099 aa29.46■■■□□ 2.31
HOMER3-201ENST00000221222 ATP8B2P98198 1209 aa29.46■■■□□ 2.31
HOMER3-201ENST00000221222 RTKN2Q8IZC4 609 aa29.46■■■□□ 2.31
HOMER3-201ENST00000221222 A0A1B0GUL6 1792 aa29.45■■■□□ 2.31
HOMER3-201ENST00000221222 PTPN12Q05209 780 aaKnown RBP29.45■■■□□ 2.31
HOMER3-201ENST00000221222 CEP85Q6P2H3 762 aa29.45■■■□□ 2.31
HOMER3-201ENST00000221222 PNMA6EA0A0J9YXQ4 647 aa29.44■■■□□ 2.3
HOMER3-201ENST00000221222 LTBP3Q9NS15 1303 aa29.44■■■□□ 2.3
HOMER3-201ENST00000221222 NFKBIEO00221 500 aa29.43■■■□□ 2.3
HOMER3-201ENST00000221222 POLA2Q14181 598 aa29.43■■■□□ 2.3
HOMER3-201ENST00000221222 LDHAL6AQ6ZMR3 332 aa29.43■■■□□ 2.3
HOMER3-201ENST00000221222 MINPP1Q9UNW1 487 aa29.43■■■□□ 2.3
HOMER3-201ENST00000221222 KLHDC4Q8TBB5 520 aa29.42■■■□□ 2.3
HOMER3-201ENST00000221222 SSH3Q8TE77 659 aa29.42■■■□□ 2.3
HOMER3-201ENST00000221222 COPRSQ9NQ92 184 aa29.42■■■□□ 2.3
HOMER3-201ENST00000221222 DUOX1Q9NRD9 1551 aa29.42■■■□□ 2.3
HOMER3-201ENST00000221222 RPAP2Q8IXW5 612 aaPredicted RBP29.41■■■□□ 2.3
HOMER3-201ENST00000221222 PODXL2Q9NZ53 605 aa29.41■■■□□ 2.3
HOMER3-201ENST00000221222 FBXO3Q9UK99 471 aa29.41■■■□□ 2.3
HOMER3-201ENST00000221222 CCDC88AQ3V6T2 1871 aa29.41■■■□□ 2.3
HOMER3-201ENST00000221222 GPSM2P81274 684 aa29.4■■■□□ 2.3
HOMER3-201ENST00000221222 AAMPQ13685 434 aa29.4■■■□□ 2.3
HOMER3-201ENST00000221222 MPNDQ8N594 471 aa29.4■■■□□ 2.3
HOMER3-201ENST00000221222 PSMD1Q99460 953 aa29.4■■■□□ 2.3
HOMER3-201ENST00000221222 PUS3Q9BZE2 481 aaKnown RBP29.4■■■□□ 2.3
HOMER3-201ENST00000221222 CNNM1Q9NRU3 951 aa29.4■■■□□ 2.3
HOMER3-201ENST00000221222 TOMM70O94826 608 aa29.39■■■□□ 2.3
HOMER3-201ENST00000221222 PRELPP51888 382 aa29.39■■■□□ 2.3
HOMER3-201ENST00000221222 FKBP4Q02790 459 aaKnown RBP eCLIP29.39■■■□□ 2.3
HOMER3-201ENST00000221222 RTFDC1Q9BY42 306 aaPredicted RBP29.39■■■□□ 2.3
HOMER3-201ENST00000221222 TAOK3Q9H2K8 898 aa29.39■■■□□ 2.3
HOMER3-201ENST00000221222 RIPOR2Q9Y4F9 1068 aa29.39■■■□□ 2.3
HOMER3-201ENST00000221222 DPP8Q6V1X1 898 aaPredicted RBP29.39■■■□□ 2.29
HOMER3-201ENST00000221222 ANKRD2Q9GZV1 360 aa29.39■■■□□ 2.29
HOMER3-201ENST00000221222 NSFL1CQ9UNZ2 370 aaKnown RBP29.39■■■□□ 2.29
HOMER3-201ENST00000221222 XDHP47989 1333 aa29.38■■■□□ 2.29
HOMER3-201ENST00000221222 EYA2O00167 538 aa29.38■■■□□ 2.29
HOMER3-201ENST00000221222 CIAO1O76071 339 aa29.38■■■□□ 2.29
HOMER3-201ENST00000221222 CHRNDQ07001 517 aa29.38■■■□□ 2.29
HOMER3-201ENST00000221222 LRRC24Q50LG9 513 aa29.38■■■□□ 2.29
HOMER3-201ENST00000221222 PA2G4Q9UQ80 394 aaKnown RBP29.38■■■□□ 2.29
HOMER3-201ENST00000221222 KDM2BQ8NHM5 1336 aa29.37■■■□□ 2.29
HOMER3-201ENST00000221222 SIRT2Q8IXJ6 389 aa29.37■■■□□ 2.29
HOMER3-201ENST00000221222 C16orf71Q8IYS4 520 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-201ENST00000221222 EXOC6Q8TAG9 804 aa29.37■■■□□ 2.29
HOMER3-201ENST00000221222 ANKIB1Q9P2G1 1089 aa29.37■■■□□ 2.29
HOMER3-201ENST00000221222 LMNB1P20700 586 aa29.36■■■□□ 2.29
HOMER3-201ENST00000221222 SUPT20HQ8NEM7 779 aa29.36■■■□□ 2.29
HOMER3-201ENST00000221222 RRAGCQ9HB90 399 aa29.36■■■□□ 2.29
HOMER3-201ENST00000221222 MROH5Q6ZUA9 1318 aa29.36■■■□□ 2.29
HOMER3-201ENST00000221222 ATG9AQ7Z3C6 839 aa29.35■■■□□ 2.29
HOMER3-201ENST00000221222 DICER1Q9UPY3 1922 aaKnown RBP29.34■■■□□ 2.29
HOMER3-201ENST00000221222 SIL1Q9H173 461 aa29.34■■■□□ 2.29
HOMER3-201ENST00000221222 TIAM2Q8IVF5 1701 aa29.33■■■□□ 2.29
HOMER3-201ENST00000221222 HMMRO75330 724 aa29.33■■■□□ 2.29
HOMER3-201ENST00000221222 IRX6P78412 446 aaPredicted RBP29.33■■■□□ 2.29
HOMER3-201ENST00000221222 TBC1D16Q8TBP0 767 aa29.33■■■□□ 2.29
HOMER3-201ENST00000221222 POLLQ9UGP5 575 aa29.33■■■□□ 2.29
HOMER3-201ENST00000221222 GGA1Q9UJY5 639 aa29.33■■■□□ 2.29
HOMER3-201ENST00000221222 ATP2B4P23634 1241 aa29.32■■■□□ 2.28
HOMER3-201ENST00000221222 IL15P40933 162 aaPredicted RBP29.32■■■□□ 2.28
HOMER3-201ENST00000221222 VGLL2Q8N8G2 317 aa29.32■■■□□ 2.28
HOMER3-201ENST00000221222 VPS33BQ9H267 617 aa29.32■■■□□ 2.28
HOMER3-201ENST00000221222 LEMD3Q9Y2U8 911 aa29.32■■■□□ 2.28
HOMER3-201ENST00000221222 NOP58Q9Y2X3 529 aaKnown RBP29.32■■■□□ 2.28
HOMER3-201ENST00000221222 UFL1O94874 794 aa29.31■■■□□ 2.28
HOMER3-201ENST00000221222 PCDHB15Q9Y5E8 787 aa29.31■■■□□ 2.28
HOMER3-201ENST00000221222 METTL24Q5JXM2 366 aa29.3■■■□□ 2.28
HOMER3-201ENST00000221222 HELBQ8NG08 1087 aaPredicted RBP29.3■■■□□ 2.28
HOMER3-201ENST00000221222 ZNF277Q9NRM2 450 aaPredicted RBP29.3■■■□□ 2.28
HOMER3-201ENST00000221222 C6orf229H3BNL8 230 aa29.29■■■□□ 2.28
HOMER3-201ENST00000221222 TAF5LO75529 589 aa29.29■■■□□ 2.28
HOMER3-201ENST00000221222 RBM46Q8TBY0 533 aaKnown RBP29.29■■■□□ 2.28
HOMER3-201ENST00000221222 ZNF804BA4D1E1 1349 aa29.28■■■□□ 2.28
HOMER3-201ENST00000221222 SURF6O75683 361 aaKnown RBP29.28■■■□□ 2.28
HOMER3-201ENST00000221222 PDE8BO95263 885 aa29.28■■■□□ 2.28
HOMER3-201ENST00000221222 IARSP41252 1262 aaKnown RBP29.28■■■□□ 2.28
HOMER3-201ENST00000221222 EYA3Q99504 573 aa29.28■■■□□ 2.28
HOMER3-201ENST00000221222 WTIPA6NIX2 430 aaPredicted RBP29.27■■■□□ 2.28
HOMER3-201ENST00000221222 APLP1P51693 650 aa29.27■■■□□ 2.28
HOMER3-201ENST00000221222 KIAA2012Q0VF49 1180 aa29.27■■■□□ 2.28
HOMER3-201ENST00000221222 G3BP1Q13283 466 aaKnown RBP eCLIP29.27■■■□□ 2.28
HOMER3-201ENST00000221222 ZC3H4Q9UPT8 1303 aaKnown RBP29.27■■■□□ 2.28
HOMER3-201ENST00000221222 WASHC4Q2M389 1173 aa29.26■■■□□ 2.28
HOMER3-201ENST00000221222 MED23Q9ULK4 1368 aa29.26■■■□□ 2.27
HOMER3-201ENST00000221222 UBE4AQ14139 1066 aa29.26■■■□□ 2.27
HOMER3-201ENST00000221222 CEP126Q9P2H0 1117 aa29.26■■■□□ 2.27
HOMER3-201ENST00000221222 COL4A5P29400 1685 aa29.25■■■□□ 2.27
HOMER3-201ENST00000221222 GLTPD2A6NH11 291 aa29.25■■■□□ 2.27
HOMER3-201ENST00000221222 PPIP5K2O43314 1243 aa29.25■■■□□ 2.27
HOMER3-201ENST00000221222 KCNJ4P48050 445 aa29.25■■■□□ 2.27
HOMER3-201ENST00000221222 AOC3Q16853 763 aa29.25■■■□□ 2.27
HOMER3-201ENST00000221222 C15orf52Q6ZUT6 534 aaKnown RBP29.24■■■□□ 2.27
HOMER3-201ENST00000221222 GPR101Q96P66 508 aaPredicted RBP29.24■■■□□ 2.27
HOMER3-201ENST00000221222 IRS2Q9Y4H2 1338 aa29.23■■■□□ 2.27
HOMER3-201ENST00000221222 SNAP23O00161 211 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms