RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 AOX1Q06278 1338 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 PNMA6AP0CW24 399 aaPredicted RBP15.98■□□□□ 0.15
GABPB1-201ENST00000220429 CHRNA2Q15822 529 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 GOLGA5Q8TBA6 731 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 ESYT1Q9BSJ8 1104 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 SLC52A2Q9HAB3 445 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 CHMLP26374 656 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 ABCC6O95255 1503 aa15.98■□□□□ 0.15
GABPB1-201ENST00000220429 GADD45BO75293 160 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-201ENST00000220429 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-201ENST00000220429 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 PDIA6Q15084 440 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 PLCD4Q9BRC7 762 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
GABPB1-201ENST00000220429 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 SH3BP1Q9Y3L3 701 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-201ENST00000220429 SPATA31A3Q5VYP0 1347 aa15.97■□□□□ 0.15
GABPB1-201ENST00000220429 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 CWF19L2Q2TBE0 894 aaKnown RBP15.96■□□□□ 0.15
GABPB1-201ENST00000220429 SUGP1Q8IWZ8 645 aaKnown RBP15.96■□□□□ 0.15
GABPB1-201ENST00000220429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
GABPB1-201ENST00000220429 PKD1L3Q7Z443 1732 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 ST18O60284 1047 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 MTX1Q13505 466 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 FAM212AQ96EL1 285 aa15.96■□□□□ 0.15
GABPB1-201ENST00000220429 SEMA3FQ13275 785 aa15.96■□□□□ 0.14
GABPB1-201ENST00000220429 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.14
GABPB1-201ENST00000220429 LRMPQ12912 555 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 MCTP2Q6DN12 878 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 BRD1O95696 1058 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 MAP2K2P36507 400 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
GABPB1-201ENST00000220429 CYP27B1O15528 508 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
GABPB1-201ENST00000220429 SLU7O95391 586 aaKnown RBP15.94■□□□□ 0.14
GABPB1-201ENST00000220429 LRCH2Q5VUJ6 765 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 CCDC186Q7Z3E2 898 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 ANKRD20A12PQ8NF67 263 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 LINS1Q8NG48 757 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 MRC1P22897 1456 aa15.94■□□□□ 0.14
GABPB1-201ENST00000220429 NPHP1O15259 732 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 CLCN6P51797 869 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 CPDO75976 1380 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 USP48Q86UV5 1035 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 IQUBQ8NA54 791 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
GABPB1-201ENST00000220429 IL25Q9H293 177 aa15.93■□□□□ 0.14
GABPB1-201ENST00000220429 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
GABPB1-201ENST00000220429 MAP4K4O95819 1239 aaPredicted RBP15.92■□□□□ 0.14
GABPB1-201ENST00000220429 GDPD2Q9HCC8 539 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 PPP1R12AO14974 1030 aaPredicted RBP15.92■□□□□ 0.14
GABPB1-201ENST00000220429 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 KAZALD1Q96I82 304 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 AK7Q96M32 723 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 CEP89Q96ST8 783 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 RBM28Q9NW13 759 aaKnown RBP15.92■□□□□ 0.14
GABPB1-201ENST00000220429 PALD1Q9ULE6 856 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 UTYO14607 1347 aa15.92■□□□□ 0.14
GABPB1-201ENST00000220429 GRM8O00222 908 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 BRINP3Q76B58 766 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 SUCLG2Q96I99 432 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
GABPB1-201ENST00000220429 IGKV5-2P06315 115 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 MYL6BP14649 208 aa15.91■□□□□ 0.14
GABPB1-201ENST00000220429 CCDC9Q9Y3X0 531 aaKnown RBP15.91■□□□□ 0.14
GABPB1-201ENST00000220429 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
GABPB1-201ENST00000220429 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
GABPB1-201ENST00000220429 FUCA2Q9BTY2 467 aa15.9■□□□□ 0.14
GABPB1-201ENST00000220429 CCDC196A0A1B0GTZ2 297 aa15.9■□□□□ 0.14
GABPB1-201ENST00000220429 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
GABPB1-201ENST00000220429 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.13
GABPB1-201ENST00000220429 MMS22LQ6ZRQ5 1243 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 NEK4P51957 841 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 ERCC6LQ2NKX8 1250 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
GABPB1-201ENST00000220429 USP16Q9Y5T5 823 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 CCDC171Q6TFL3 1326 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 STRCQ7RTU9 1775 aa15.89■□□□□ 0.13
GABPB1-201ENST00000220429 TRDNQ13061 729 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 RPAINQ86UA6 219 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 UBXN6Q9BZV1 441 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 ZCCHC17Q9NP64 241 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms