RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 IPO4Q8TEX9 1081 aaKnown RBP24.04■■□□□ 1.44
FMR1-201ENST00000218200 LGR6Q9HBX8 967 aa24.04■■□□□ 1.44
FMR1-201ENST00000218200 PTPRMP28827 1452 aa24.04■■□□□ 1.44
FMR1-201ENST00000218200 RANBP6O60518 1105 aaKnown RBP24.03■■□□□ 1.44
FMR1-201ENST00000218200 UBASH3AP57075 661 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 KIAA0232Q92628 1395 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 CD2BP2O95400 341 aaKnown RBP24.03■■□□□ 1.44
FMR1-201ENST00000218200 USP19O94966 1318 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 KLF18A0A0U1RQI7 1052 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 NMIQ13287 307 aaPredicted RBP24.03■■□□□ 1.44
FMR1-201ENST00000218200 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 CALCOCO1Q9P1Z2 691 aa24.03■■□□□ 1.44
FMR1-201ENST00000218200 GOLGA6L10A6NI86 522 aa24.02■■□□□ 1.44
FMR1-201ENST00000218200 SEPT11Q9NVA2 429 aaKnown RBP24.02■■□□□ 1.44
FMR1-201ENST00000218200 PLEKHG1Q9ULL1 1385 aa24.02■■□□□ 1.44
FMR1-201ENST00000218200 PDIA4P13667 645 aaKnown RBP24.02■■□□□ 1.44
FMR1-201ENST00000218200 USP5P45974 858 aa24.02■■□□□ 1.44
FMR1-201ENST00000218200 BMS1Q14692 1282 aaKnown RBP24.02■■□□□ 1.44
FMR1-201ENST00000218200 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
FMR1-201ENST00000218200 GTF3C6Q969F1 213 aa24.02■■□□□ 1.44
FMR1-201ENST00000218200 GOLGA8AA7E2F4 631 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 GSDMDP57764 484 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 IL17REQ8NFR9 667 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 GSPT1P15170 499 aaKnown RBP24.01■■□□□ 1.43
FMR1-201ENST00000218200 NBPF6Q5VWK0 638 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 NBPF4Q96M43 638 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 FAM107BQ9H098 131 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 ARHGEF10O15013 1369 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 PNMA6EA0A0J9YXQ4 647 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 RIOK3O14730 519 aaKnown RBP24.01■■□□□ 1.43
FMR1-201ENST00000218200 SYT10Q6XYQ8 523 aa24.01■■□□□ 1.43
FMR1-201ENST00000218200 CCDC94Q9BW85 323 aaPredicted RBP24.01■■□□□ 1.43
FMR1-201ENST00000218200 USP6P35125 1406 aa24■■□□□ 1.43
FMR1-201ENST00000218200 AFMP43652 599 aa24■■□□□ 1.43
FMR1-201ENST00000218200 ANAPC15P60006 121 aa24■■□□□ 1.43
FMR1-201ENST00000218200 SRRTQ9BXP5 876 aaKnown RBP24■■□□□ 1.43
FMR1-201ENST00000218200 PAXBP1Q9Y5B6 917 aa24■■□□□ 1.43
FMR1-201ENST00000218200 CCDC191Q8NCU4 936 aa24■■□□□ 1.43
FMR1-201ENST00000218200 SLC12A7Q9Y666 1083 aa24■■□□□ 1.43
FMR1-201ENST00000218200 RXRAP19793 462 aa24■■□□□ 1.43
FMR1-201ENST00000218200 BBXQ8WY36 941 aaPredicted RBP24■■□□□ 1.43
FMR1-201ENST00000218200 NDUFB9Q9Y6M9 179 aa24■■□□□ 1.43
FMR1-201ENST00000218200 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
FMR1-201ENST00000218200 ZSCAN25Q6NSZ9 544 aa23.99■■□□□ 1.43
FMR1-201ENST00000218200 SLC26A6Q9BXS9 759 aa23.99■■□□□ 1.43
FMR1-201ENST00000218200 CDK12Q9NYV4 1490 aaPredicted RBP23.99■■□□□ 1.43
FMR1-201ENST00000218200 SYKP43405 635 aa23.99■■□□□ 1.43
FMR1-201ENST00000218200 KLHDC4Q8TBB5 520 aa23.99■■□□□ 1.43
FMR1-201ENST00000218200 ARHGEF40Q8TER5 1519 aa23.99■■□□□ 1.43
FMR1-201ENST00000218200 NEMFO60524 1076 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 IQSEC3Q9UPP2 1182 aaPredicted RBP23.98■■□□□ 1.43
FMR1-201ENST00000218200 RTL1A6NKG5 1358 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 MROH1Q8NDA8 1641 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 APOBRQ0VD83 1088 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 COPS6Q7L5N1 327 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 IFNKQ9P0W0 207 aa23.98■■□□□ 1.43
FMR1-201ENST00000218200 KARSQ15046 597 aaKnown RBP23.97■■□□□ 1.43
FMR1-201ENST00000218200 A0A1B0GVL5 298 aa23.97■■□□□ 1.43
FMR1-201ENST00000218200 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
FMR1-201ENST00000218200 HMGB1P09429 215 aaKnown RBP23.97■■□□□ 1.43
FMR1-201ENST00000218200 HS1BP3Q53T59 392 aa23.97■■□□□ 1.43
FMR1-201ENST00000218200 CCDC102BQ68D86 513 aa23.97■■□□□ 1.43
FMR1-201ENST00000218200 CTDP1Q9Y5B0 961 aaPredicted RBP23.97■■□□□ 1.43
FMR1-201ENST00000218200 PIK3C2BO00750 1634 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
FMR1-201ENST00000218200 CCDC148Q8NFR7 591 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 STX17P56962 302 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 SOGA3Q5TF21 947 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 CREB3L3Q68CJ9 461 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 DRC1Q96MC2 740 aa23.96■■□□□ 1.43
FMR1-201ENST00000218200 KSR2Q6VAB6 950 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 LDHAL6AQ6ZMR3 332 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 GNL3LQ9NVN8 582 aaKnown RBP23.95■■□□□ 1.42
FMR1-201ENST00000218200 SLU7O95391 586 aaKnown RBP23.95■■□□□ 1.42
FMR1-201ENST00000218200 TMEM67Q5HYA8 995 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 SMARCC1Q92922 1105 aaPredicted RBP23.95■■□□□ 1.42
FMR1-201ENST00000218200 NEFHP12036 1026 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 OTUD7BQ6GQQ9 843 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 LMBR1LQ6UX01 489 aa23.95■■□□□ 1.42
FMR1-201ENST00000218200 MRPS27Q92552 414 aaKnown RBP23.95■■□□□ 1.42
FMR1-201ENST00000218200 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
FMR1-201ENST00000218200 CCDC113Q9H0I3 377 aa23.94■■□□□ 1.42
FMR1-201ENST00000218200 MED14O60244 1454 aa23.94■■□□□ 1.42
FMR1-201ENST00000218200 TIGD1Q96MW7 591 aa23.94■■□□□ 1.42
FMR1-201ENST00000218200 BCCIPQ9P287 314 aaKnown RBP eCLIP23.94■■□□□ 1.42
FMR1-201ENST00000218200 KIF24Q5T7B8 1368 aa23.94■■□□□ 1.42
FMR1-201ENST00000218200 TRMT1LQ7Z2T5 733 aaKnown RBP23.94■■□□□ 1.42
FMR1-201ENST00000218200 N4BP3O15049 544 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 RNMTO43148 476 aaKnown RBP23.93■■□□□ 1.42
FMR1-201ENST00000218200 METAP2P50579 478 aaKnown RBP eCLIP23.93■■□□□ 1.42
FMR1-201ENST00000218200 ZNF445P59923 1031 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 TDRD12Q587J7 1177 aaKnown RBP23.93■■□□□ 1.42
FMR1-201ENST00000218200 CCDC129Q6ZRS4 1044 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 LZTFL1Q9NQ48 299 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms