RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Shtn1Q8K2Q9 631 aa17.47■□□□□ 0.39
Ldb3-207ENSMUST00000227819 Rbbp6P97868 1790 aaKnown RBP17.47■□□□□ 0.39
Ldb3-207ENSMUST00000227819 Rps12P63323 132 aaKnown RBP17.46■□□□□ 0.39
Ldb3-207ENSMUST00000227819 Terf1P70371 421 aa17.46■□□□□ 0.39
Ldb3-207ENSMUST00000227819 D1Pas1P16381 660 aa17.45■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Tmem143Q8VD26 458 aa17.45■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Pcdh15Q99PJ1 1943 aa17.45■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Kifc2O08672 792 aa17.44■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Csrnp1P59054 583 aa17.44■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Sh3bp5Q9Z131 463 aa17.44■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Rbm33Q9CXK9 1231 aaKnown RBP17.44■□□□□ 0.38
Ldb3-207ENSMUST00000227819 NrapQ80XB4 1728 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 GabreA2AMW3 916 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Bin2D3Z6Q9 489 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Casp1P29452 402 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Large2Q5XPT3 690 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 InsrrQ9WTL4 1300 aa17.43■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Cxcl9P18340 126 aa17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 LeprP48356 1162 aa17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Q3UJP5 209 aa17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Tmem130Q6NXM3 419 aa17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Znfx1Q8R151 1909 aaKnown RBP17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Polr2aP08775 1970 aaKnown RBP17.42■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Eif3aP23116 1344 aaKnown RBP17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Usp17lbE9Q9U0 468 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Gpr182P43142 395 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Ccdc51Q3URS9 406 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Ankrd13cQ3UX43 541 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Agtpbp1Q641K1 1218 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Nlrp9bQ66X22 1003 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 RubcnQ80U62 956 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Ppil2Q9D787 521 aa17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Celf2Q9Z0H4 508 aaKnown RBP17.41■□□□□ 0.38
Ldb3-207ENSMUST00000227819 SisF8VQM5 1818 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Col3a1P08121 1464 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Cap1P40124 474 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Adamts19P59509 1210 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Q3UPC7 1272 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Adora1Q60612 326 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Znf330Q922H9 316 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Osbpl5Q9ER64 874 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Peak1Q69Z38 1735 aa17.4■□□□□ 0.38
Ldb3-207ENSMUST00000227819 Ddx31Q6NZQ2 687 aaKnown RBP17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Fchsd1Q6PFY1 688 aa17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Znf18Q810A1 556 aa17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Ncoa5Q91W39 579 aaKnown RBP17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Chmp3Q9CQ10 224 aa17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Plekho1Q9JIY0 408 aa17.39■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Prl3d2F6R3P9 224 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Tlr7P58681 1050 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Nutm1Q8BHP2 1126 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 WdpcpQ8C456 722 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Tm4sf4Q91XD3 202 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Cfap44E9Q5M6 1843 aa17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 AfdnQ9QZQ1 1820 aaKnown RBP17.38■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Pou3f3P31361 497 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Mxd3Q80US8 206 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Mrpl12Q9DB15 201 aaKnown RBP17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Gtf2iQ9ESZ8 998 aaKnown RBP17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Nup98Q6PFD9 1816 aaKnown RBP17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Scn11aQ9R053 1765 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Oog3Q3UWY1 500 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Rab3gap1Q80UJ7 981 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Sh3bp5lQ99LH9 392 aa17.37■□□□□ 0.37
Ldb3-207ENSMUST00000227819 GabrdP22933 449 aa17.36■□□□□ 0.37
Ldb3-207ENSMUST00000227819 VgfQ0VGU4 617 aa17.36■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Trappc12Q8K2L8 797 aa17.36■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Telo2Q9DC40 840 aaKnown RBP17.36■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Mageb2A2AHM0 380 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Ftl2P49945 183 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Abhd15Q5F2F2 459 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Fstl1Q62356 306 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Ofd1Q80Z25 1017 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Ndfip2Q91ZP6 311 aa17.35■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Slc44a4Q91VA1 707 aa17.34■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Glrx3Q9CQM9 337 aa17.34■□□□□ 0.37
Ldb3-207ENSMUST00000227819 EspnlQ3UYR4 1005 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Nell2Q61220 819 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Foxn1Q61575 648 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Tgfb1i1Q62219 461 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Mum1Q6DID5 682 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 LratQ9JI60 231 aa17.33■□□□□ 0.37
Ldb3-207ENSMUST00000227819 Tpx2A2APB8 745 aaKnown RBP17.32■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Pde4aO89084 844 aa17.32■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Lman1lQ8VCD3 505 aa17.32■□□□□ 0.36
Ldb3-207ENSMUST00000227819 ParvgQ9ERD8 331 aa17.32■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Zmynd8A2A484 1235 aaKnown RBP17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Ifi207E9Q3L4 978 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 HunkO88866 714 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 AppP12023 770 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Wnt10bP48614 389 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Rhbdl3P58873 404 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Plekhf1Q3TB82 279 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 LdhdQ7TNG8 484 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Dhx38Q80X98 1228 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Plcd4Q8K3R3 807 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Prg3Q9JL95 222 aa17.31■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Lama2Q60675 3118 aaKnown RBP17.3■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Zkscan8Q8BSL0 588 aa17.3■□□□□ 0.36
Ldb3-207ENSMUST00000227819 Kbtbd13Q8C828 458 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms