RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Bloc1s2Q9CWG9 143 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Exoc1Q8R3S6 894 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Cep85Q8BMK0 761 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Tnni2P13412 182 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 4930548H24RikQ9D496 437 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Bicdl1A0JNT9 577 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Gjb2Q00977 226 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Mrpl44Q9CY73 333 aaKnown RBP20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Lig3P97386 1015 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Bcl11bQ99PV8 884 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Stag1Q9D3E6 1258 aa20.7■□□□□ 0.9
Trim71-201ENSMUST00000111816 Stx6Q9JKK1 255 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Pcyt1aP49586 367 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Slc7a3P70423 618 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ift88Q61371 824 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ubxn1Q922Y1 297 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Syce1Q9D495 329 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ptpn14Q62130 1189 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Sos1Q62245 1319 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Clcn1Q64347 994 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Klhdc4Q921I2 584 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Cfap73J3QPZ5 306 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Skida1Q80YR3 822 aa20.69■□□□□ 0.9
Trim71-201ENSMUST00000111816 Dab2P98078 766 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Zscan29E9Q5B4 869 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Wwc1Q5SXA9 1104 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Zranb3Q6NZP1 1069 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Serpinc1P32261 465 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Pet2A2AHY8 747 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Gimap6Q8K349 305 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Arhgef6Q8K4I3 771 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Mum1Q6DID5 682 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Zswim4Q8C7B8 1101 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Dbn1Q9QXS6 706 aa20.68■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ppp1r21Q3TDD9 780 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ubash3aQ3V3E1 624 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Bag2Q91YN9 210 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Mcur1Q9CXD6 340 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Wdhd1P59328 1117 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Tldc2A2ACG1 198 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Gm10378F6XQQ1 160 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 S100a5P63084 93 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Fkbp4P30416 458 aa20.67■□□□□ 0.9
Trim71-201ENSMUST00000111816 Cers3Q1A3B0 383 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Sart1Q9Z315 806 aaKnown RBP20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Gm3409A0A0G2JE67 319 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Speer4dL7N216 212 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Nop2Q922K7 793 aaKnown RBP20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Traf1P39428 409 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Rlbp1Q9Z275 317 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Pex19Q8VCI5 299 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Sh3bp1P55194 680 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 VeztQ3ZK22 780 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Bin1O08539 588 aaKnown RBP20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Sox13Q04891 613 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Stx12Q9ER00 274 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Hmg20bQ9Z104 317 aa20.66■□□□□ 0.9
Trim71-201ENSMUST00000111816 Btn2a2A4QPC6 514 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Spg7Q3ULF4 781 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Rbm27Q5SFM8 1060 aaKnown RBP20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Cdca7Q9D0M2 382 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Kcnn1Q9EQR3 537 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 RilpQ5ND29 369 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Speer2E9Q9U2 264 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Tmem67Q8BR76 992 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Rapgef3Q8VCC8 918 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Gbp10Q000W5 611 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Map3k11Q80XI6 850 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Nudcd3Q8R1N4 363 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Nlrp4cQ3TKR3 982 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Kif11Q6P9P6 1052 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Pnpla2Q8BJ56 486 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Atp6v1e1P50518 226 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 CacybpQ9CXW3 229 aa20.65■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ift20Q61025 132 aa20.64■□□□□ 0.9
Trim71-201ENSMUST00000111816 Atp2a3Q64518 1038 aa20.64■□□□□ 0.9
Trim71-201ENSMUST00000111816 Ttc21aQ8C0S4 1314 aa20.64■□□□□ 0.9
Trim71-201ENSMUST00000111816 Flot1O08917 428 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tpd52Q62393 224 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Klhl30Q8C3F7 581 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Zmynd8A2A484 1235 aaKnown RBP20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Gm6588E9Q3K0 461 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ror2Q9Z138 944 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Polr3dQ91WD1 398 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ak9G3UYQ4 1894 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Cetn3O35648 167 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Pih1h3bQ8C6P5 218 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 TkfcQ8VC30 578 aa20.64■□□□□ 0.89
Trim71-201ENSMUST00000111816 Bfsp1A2AMT1 669 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Usp8Q80U87 1080 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tdo2P48776 406 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Kmt5bQ3U8K7 883 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Lonp1Q8CGK3 949 aaKnown RBP20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Dtnbp1Q91WZ8 352 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tfip11Q9ERA6 838 aaKnown RBP20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Zfp444Q3TDV8 331 aaKnown RBP20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ccdc157Q5SPX1 718 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ctdp1Q7TSG2 960 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Unc13aQ4KUS2 1712 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 Dzip1Q8BMD2 852 aa20.63■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms