RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 InsrrQ9WTL4 1300 aa17.38■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Polr2aP08775 1970 aaKnown RBP17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Pou3f3P31361 497 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ankrd13cQ3UX43 541 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Gnat3Q3V3I2 354 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ppp1r1bQ60829 194 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Gm2163Q6PCY5 473 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Dpp7Q9ET22 506 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ccdc171E9Q1U1 1324 aa17.37■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Rbbp6P97868 1790 aaKnown RBP17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Usp17lbE9Q9U0 468 aa17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 D1Pas1P16381 660 aa17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Llgl2Q3TJ91 1027 aa17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ddx46Q569Z5 1032 aaKnown RBP17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ric3Q8BPM6 367 aa17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Mtmr2Q9Z2D1 643 aa17.36■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ell2Q3UKU1 639 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Tgfb1i1Q62219 461 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Znf219Q6IQX8 726 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 RubcnQ80U62 956 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Slc14a2Q8R4T9 930 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ncoa5Q91W39 579 aaKnown RBP17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ndfip2Q91ZP6 311 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Osbpl5Q9ER64 874 aa17.35■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Phrf1A6H619 1682 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Cxcl9P18340 126 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Adamts19P59509 1210 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Plekhf1Q3TB82 279 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 GpkowQ56A08 488 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Eif4g2Q62448 906 aaKnown RBP17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Znfx1Q8R151 1909 aaKnown RBP17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Fbxo33Q8VE08 562 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Slc44a4Q91VA1 707 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Tm4sf4Q91XD3 202 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Ppil2Q9D787 521 aa17.34■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 AfdnQ9QZQ1 1820 aaKnown RBP17.33■□□□□ 0.37
Ccdc58-201ENSMUST00000099937 Rps12P63323 132 aaKnown RBP17.33■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 VgfQ0VGU4 617 aa17.33■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Nell2Q61220 819 aa17.33■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Sytl4Q9R0Q1 673 aa17.33■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Agtpbp1Q641K1 1218 aa17.32■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Nutm1Q8BHP2 1126 aa17.32■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Tmem143Q8VD26 458 aa17.32■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Casp1P29452 402 aa17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Cap1P40124 474 aa17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Rhbdl3P58873 404 aa17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Csrnp1P59054 583 aa17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 EspnlQ3UYR4 1005 aa17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Nup98Q6PFD9 1816 aaKnown RBP17.31■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Prl3d2F6R3P9 224 aa17.3■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 LeprP48356 1162 aa17.3■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 NyxP83503 476 aa17.3■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Oog3Q3UWY1 500 aa17.3■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 GabrdP22933 449 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Ftl2P49945 183 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Terf1P70371 421 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 NexnQ7TPW1 607 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Rab3gap1Q80UJ7 981 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 LratQ9JI60 231 aa17.29■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Ankrd44B2RXR6 993 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Kifc2O08672 792 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Q3UJP5 209 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Dhx38Q80X98 1228 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 WdpcpQ8C456 722 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Znf330Q922H9 316 aa17.28■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Nkx1-1G3UXB3 402 aa17.27■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Irf6P97431 467 aa17.27■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Large2Q5XPT3 690 aa17.27■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Fchsd1Q6PFY1 688 aa17.27■□□□□ 0.36
Ccdc58-201ENSMUST00000099937 Scn11aQ9R053 1765 aa17.27■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Nol10Q5RJG1 687 aaKnown RBP17.26■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Atg9aQ68FE2 551 aa17.26■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Trappc12Q8K2L8 797 aa17.26■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Gtf2iQ9ESZ8 998 aaKnown RBP17.26■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Celf2Q9Z0H4 508 aaKnown RBP17.26■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Tpx2A2APB8 745 aaKnown RBP17.24■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Wnt10bP48614 389 aa17.24■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Plekho1Q9JIY0 408 aa17.24■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Scn10aQ6QIY3 1958 aa17.24■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Abhd15Q5F2F2 459 aa17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Slc10a5Q5PT54 434 aa17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Foxn1Q61575 648 aa17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Ddx31Q6NZQ2 687 aaKnown RBP17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Smc4Q8CG47 1286 aa17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Aldh1l1Q8R0Y6 902 aa17.23■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 LtbrP50284 415 aa17.22■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Ofd1Q80Z25 1017 aa17.22■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Zkscan8Q8BSL0 588 aa17.22■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Ankrd63A2ARS0 390 aa17.21■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Pa2g4P50580 394 aaKnown RBP17.21■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Fam83bQ0VBM2 1012 aa17.21■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 OsbpQ3B7Z2 805 aa17.21■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Cfap44E9Q5M6 1843 aa17.21■□□□□ 0.35
Ccdc58-201ENSMUST00000099937 Eif3aP23116 1344 aaKnown RBP17.21■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Prr14lE9Q7C4 1971 aa17.2■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Prl3d3A0A0M6L0J6 224 aa17.2■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Gm42688A0A0R3P9D1 673 aa17.2■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Prpmp5E9PXN1 296 aa17.2■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Sult6b1P0CC03 303 aa17.2■□□□□ 0.34
Ccdc58-201ENSMUST00000099937 Plbd2Q3TCN2 594 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 307 ms