RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Nup88Q8CEC0 753 aaKnown RBP8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Nrbp1Q99J45 535 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Bag3Q9JLV1 577 aaKnown RBP8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Mst1rQ62190 1378 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ddx60E9PZQ1 1711 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Kansl3A2RSY1 903 aaKnown RBP8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 AK157302I3ITR1 129 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ccdc162pQ0VG85 912 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Rab3gap1Q80UJ7 981 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Cchcr1Q8K2I2 770 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ncoa5Q91W39 579 aaKnown RBP8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Isca1Q9D924 129 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tpd52l1O54818 204 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Hmx1O70218 332 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 MpndQ3TV65 487 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ccdc66Q6NS45 935 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tsr2Q8C8T8 191 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Cdca7lQ922M5 438 aa8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Kiaa0232Q80U59 1396 aaKnown RBP8.47□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tiam2Q6ZPF3 1715 aa8.46□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ddx46Q569Z5 1032 aaKnown RBP8.46□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Polr3gQ6NXY9 223 aa8.46□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Dync1i1O88485 628 aa8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Pkp1P97350 728 aaKnown RBP8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Jmjd4Q8BFT6 427 aa8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tceanc2Q8R2M0 207 aa8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mrpl50Q8VDT9 159 aaKnown RBP8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ndufa8Q9DCJ5 172 aa8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Pus3Q9JI38 481 aa8.46□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Gm973E9Q295 1059 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mdm2P23804 489 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tyro3P55144 880 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cfap157Q0VFX2 523 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 VeztQ3ZK22 780 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ano6Q6P9J9 911 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Stac3Q8BZ71 360 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Igbp1bQ9QZ29 343 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sult6b1P0CC03 303 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Chrm1P12657 460 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ccz1Q8C1Y8 480 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Plcd3Q8K2J0 785 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 MypopQ8R4U1 393 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Gigyf1Q99MR1 1044 aaKnown RBP8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Fam213aQ9CYH2 218 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ifi35Q9D8C4 286 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ank1Q02357 1862 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nphp3Q7TNH6 1325 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Klhl34A2AI76 644 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Dctn1O08788 1281 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cdk4P30285 303 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ercc3P49135 783 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Klc3Q91W40 508 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 PdcQ9QW08 244 aa8.45□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mast2Q60592 1734 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cyp19a1P28649 503 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cdkn1cP49919 348 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 NpeppsQ11011 920 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cnnm3Q32NY4 713 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Esyt1Q3U7R1 1092 aaKnown RBP8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Morc2aQ69ZX6 1030 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Frmd3Q8BHD4 595 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Rbm33Q9CXK9 1231 aaKnown RBP8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sema6bO54951 886 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ap5z1Q3U829 807 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ifit2Q64112 472 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Atg9aQ68FE2 551 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nyap1Q6PFX7 833 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tmem87bQ8BKU8 555 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Pm20d1Q8C165 503 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ginm1Q91WR6 327 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tlcd1Q99JT6 247 aa8.44□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sos2Q02384 1333 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Prl3d3A0A0M6L0J6 224 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Kcnb2A6H8H5 907 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cspp1B2RX88 1205 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 MecomP14404 1042 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 CgnP59242 1191 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Lins1Q3U1D0 764 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nop14Q8R3N1 860 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Top1mtQ8R4U6 593 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Popdc2Q9ES82 367 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Trip6Q9Z1Y4 480 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Wdr33Q8K4P0 1330 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Rbbp8nlA2ABX0 614 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Eef2kO08796 724 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Lnx1O70263 728 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nol10Q5RJG1 687 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Leo1Q5XJE5 667 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Slf2Q6P9P0 1278 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Clca2Q8BG22 942 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Golim4Q8BXA1 655 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Zfp113Q8C689 439 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ttc27Q8CD92 847 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Q9D9S1 216 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Prr5lA2AVJ5 370 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cyp2c23E9Q5K4 494 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tpm3P21107 285 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 RdxP26043 583 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cers3Q1A3B0 383 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 TfrcQ62351 763 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms