RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Sde2Q8K1J5 448 aaKnown RBP18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Prkab2Q6PAM0 271 aa18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 SympkQ80X82 1284 aa18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Kiaa1524Q8BWY9 907 aa18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Skint5A7XUY5 1461 aa18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ddb1Q3U1J4 1140 aaKnown RBP18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ctr9Q62018 1173 aaKnown RBP18.92■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 MarcksP26645 309 aaKnown RBP18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 GlmnQ8BZM1 596 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Exoc1Q8R3S6 894 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Lrrc7Q80TE7 1490 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Zfp853A0A1D5RM95 733 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Pla2g4fQ50L41 855 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Luc7l2Q7TNC4 392 aaKnown RBP18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Mrpl12Q9DB15 201 aaKnown RBP18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Rnf216P58283 853 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Tekt3Q6X6Z7 490 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 AdnpQ9Z103 1108 aaKnown RBP18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Aifm3Q3TY86 605 aa18.91■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Myo1bP46735 1107 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Asic1Q6NXK8 526 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 IqcgQ80W32 419 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Vps54Q5SPW0 977 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Glg1Q61543 1175 aaKnown RBP18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Arhgef18Q6P9R4 1021 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ufl1Q8CCJ3 793 aaKnown RBP18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Prl3d3A0A0M6L0J6 224 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Myl3P09542 204 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Cyp4f39Q8BGU0 532 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Slc39a6Q8C145 765 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Zkscan4Q5SZT6 480 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ctnna2Q61301 953 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Pram1Q6BCL1 675 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Tubb4aQ9D6F9 444 aa18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Acot9Q9R0X4 439 aaKnown RBP18.9■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Arhgef40Q3UPH7 1517 aa18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Fam186bD3Z420 943 aa18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Hdhd2Q3UGR5 259 aa18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Krt15Q61414 452 aa18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Xrcc4Q924T3 326 aa18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Smc1aQ9CU62 1233 aaKnown RBP18.89■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Stk36Q69ZM6 1316 aa18.89■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Abcc2Q8VI47 1543 aa18.89■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 IntuQ059U7 942 aa18.89■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Epb41l3Q9WV92 929 aa18.89■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Myl6bQ8CI43 207 aa18.89■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Tmx3Q8BXZ1 456 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Pde3aQ9Z0X4 1141 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Utp18Q5SSI6 552 aaKnown RBP18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Rad17Q6NXW6 688 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Tmod2Q9JKK7 351 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Olfm5Q8BU90 496 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Gm45015A0A140LII9 184 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 AU022751B1B0V2 589 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Casp1P29452 402 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 CrklP47941 303 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Snrpa1P57784 255 aaKnown RBP18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 2310002L09RikQ9D7L5 217 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Mlh1Q9JK91 760 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Rlbp1Q9Z275 317 aa18.88■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Terf2ipQ91VL8 393 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 TnksQ6PFX9 1320 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Cops6O88545 324 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Timm10P62073 90 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ppfibp1Q8C8U0 969 aaKnown RBP18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 SltmQ8CH25 1031 aaKnown RBP18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Eya2O08575 532 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Gle1Q8R322 699 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Cyp2ab1S4R196 498 aa18.87■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Iffo1Q8BXL9 562 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Lmbrd2Q8C561 694 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Abcc1O35379 1528 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Lmtk2Q3TYD6 1471 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Setdb1O88974 1307 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 TrdnE9Q9K5 693 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Hmgb1P63158 215 aaKnown RBP18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Gas8Q60779 478 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Acnat2Q8BGG9 420 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Nlgn1Q99K10 843 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ccdc94Q9D6J3 314 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Cyp27a1Q9DBG1 533 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Tbc1d8Q9Z1A9 1134 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Adcy10Q8C0T9 1614 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Nphp4P59240 1425 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Usp37Q8C0R0 979 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Rbm17Q8JZX4 405 aaKnown RBP18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Fam76aQ922G2 307 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ttc14Q9CSP9 761 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Irs4Q9Z0Y7 1216 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Mcm6P97311 821 aa18.86■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Zbtb45Q52KG4 520 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Rab3gap1Q80UJ7 981 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 RalylQ8BTF8 293 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Fam43aQ8BUP8 424 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Als2cr12Q8BVM7 383 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Mast3Q3U214 1321 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Spocd1B1ASB6 936 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ccdc42Q5SV66 316 aa18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 Ddx27Q921N6 760 aaKnown RBP18.85■□□□□ 0.61
Ubfd1-201ENSMUST00000033158 LratQ9JI60 231 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms