RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Mtmr3Q8K296 1196 aa22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 Snw1Q9CSN1 536 aaKnown RBP22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ubn2Q80WC1 1314 aa22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 Sh3bp1P55194 680 aa22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 Dhx40Q6PE54 779 aaKnown RBP22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 CenpqQ9CPQ5 267 aa22.62■■□□□ 1.21
Tram1-201ENSMUST00000027068 Zkscan4Q5SZT6 480 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ercc6lQ8BHK9 1240 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ift57Q8BXG3 429 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Pdzd9Q9D9M4 266 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ltv1Q6NSQ7 470 aaKnown RBP22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Fsd1Q7TPM6 496 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ptcd1Q8C2E4 695 aaKnown RBP22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Otud6bQ8K2H2 294 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Mrpl44Q9CY73 333 aaKnown RBP22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 4930548H24RikQ9D496 437 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ccdc129Q14B48 1034 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 L1td1Q587J6 782 aaKnown RBP22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Golim4Q8BXA1 655 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Mb21d2Q8C525 428 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 PigbQ9JJQ0 542 aa22.61■■□□□ 1.21
Tram1-201ENSMUST00000027068 Pms1Q8K119 917 aa22.6■■□□□ 1.21
Tram1-201ENSMUST00000027068 Bin1O08539 588 aaKnown RBP22.6■■□□□ 1.21
Tram1-201ENSMUST00000027068 Usp44Q8C2S0 711 aa22.6■■□□□ 1.21
Tram1-201ENSMUST00000027068 XpcP51612 930 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Tmem109Q3UBX0 243 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Ccdc82Q6PG04 518 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Gpatch3Q8BIY1 525 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Tubb6Q922F4 447 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Alpk3Q924C5 1678 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Prdm4Q80V63 803 aa22.59■■□□□ 1.21
Tram1-201ENSMUST00000027068 Arap3Q8R5G7 1538 aa22.58■■□□□ 1.21
Tram1-201ENSMUST00000027068 Cyp2d10P24456 504 aa22.58■■□□□ 1.21
Tram1-201ENSMUST00000027068 Smarcc2Q6PDG5 1213 aa22.58■■□□□ 1.21
Tram1-201ENSMUST00000027068 Timm10P62073 90 aa22.58■■□□□ 1.21
Tram1-201ENSMUST00000027068 Q8BZJ8 459 aa22.58■■□□□ 1.2
Tram1-201ENSMUST00000027068 Hps3Q91VB4 1002 aa22.58■■□□□ 1.2
Tram1-201ENSMUST00000027068 Rrs1Q9CYH6 365 aaKnown RBP22.58■■□□□ 1.2
Tram1-201ENSMUST00000027068 InsrrQ9WTL4 1300 aa22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 TrdnE9Q9K5 693 aa22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 Rgs9O54828 675 aa22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 Rrp1P56183 494 aaKnown RBP22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 Soga3Q6NZL0 945 aa22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 Gm21985Q6P6P5 1106 aa22.57■■□□□ 1.2
Tram1-201ENSMUST00000027068 Irx2P81066 474 aa22.56■■□□□ 1.2
Tram1-201ENSMUST00000027068 Ddx41Q91VN6 622 aaKnown RBP22.56■■□□□ 1.2
Tram1-201ENSMUST00000027068 BcorQ8CGN4 1759 aa22.56■■□□□ 1.2
Tram1-201ENSMUST00000027068 Ncoa4Q5U4H9 625 aa22.56■■□□□ 1.2
Tram1-201ENSMUST00000027068 Elf2Q9JHC9 593 aa22.56■■□□□ 1.2
Tram1-201ENSMUST00000027068 Znf568E9PYI1 671 aa22.55■■□□□ 1.2
Tram1-201ENSMUST00000027068 Cyp2d34L7N463 504 aa22.55■■□□□ 1.2
Tram1-201ENSMUST00000027068 Gimap6Q8K349 305 aa22.55■■□□□ 1.2
Tram1-201ENSMUST00000027068 Kcnh5Q920E3 988 aa22.55■■□□□ 1.2
Tram1-201ENSMUST00000027068 Col4a3bpQ9EQG9 624 aa22.55■■□□□ 1.2
Tram1-201ENSMUST00000027068 Rbm17Q8JZX4 405 aaKnown RBP22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Frat2Q8K025 231 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Chmp7Q8R1T1 451 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Samsn1P57725 372 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Hand2Q61039 217 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Ripor2Q80U16 1078 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 MypnQ5DTJ9 1315 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Tmem87bQ8BKU8 555 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Rufy2Q8R4C2 606 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Nid2O88322 1403 aa22.54■■□□□ 1.2
Tram1-201ENSMUST00000027068 Pramel3A2AHA7 463 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Gm7903A2AWL1 463 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 AV320801A2AWL3 467 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Gm15023L7MUB4 467 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Surf1P09925 306 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Iqsec3Q3TES0 1195 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Clic4Q9QYB1 253 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Zmynd15Q8C0R7 736 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Xpo4Q9ESJ0 1151 aa22.53■■□□□ 1.2
Tram1-201ENSMUST00000027068 Ddx27Q921N6 760 aaKnown RBP22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 Fam50bQ9WTJ8 334 aa22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 Nfat5Q9WV30 1534 aa22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 Chmp3Q9CQ10 224 aa22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 TefQ9JLC6 301 aa22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 Zkscan5Q9Z1D8 819 aa22.52■■□□□ 1.2
Tram1-201ENSMUST00000027068 Ehd2Q8BH64 543 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Erc1Q99MI1 1120 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Spty2d1Q68FG3 682 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Alg3Q8K2A8 438 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Luzp1Q8R4U7 1068 aaKnown RBP22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Odf2lQ9D478 642 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Terf2ipQ91VL8 393 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Zeb2Q9R0G7 1215 aa22.51■■□□□ 1.19
Tram1-201ENSMUST00000027068 Exosc10P56960 887 aaKnown RBP22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Anks1aP59672 1150 aa22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Trim56Q80VI1 734 aaKnown RBP22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Cdca8Q8BHX3 289 aa22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Trim59Q922Y2 403 aa22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Hspd1P63038 573 aaKnown RBP22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 BrapQ99MP8 591 aa22.5■■□□□ 1.19
Tram1-201ENSMUST00000027068 Fkbp5Q64378 456 aa22.49■■□□□ 1.19
Tram1-201ENSMUST00000027068 ThemisQ8BGW0 636 aa22.49■■□□□ 1.19
Tram1-201ENSMUST00000027068 Kcnq3Q8K3F6 873 aa22.49■■□□□ 1.19
Tram1-201ENSMUST00000027068 Dnaaf4Q8R368 420 aa22.49■■□□□ 1.19
Tram1-201ENSMUST00000027068 BbxQ8VBW5 907 aa22.49■■□□□ 1.19
Tram1-201ENSMUST00000027068 Stk38Q91VJ4 465 aa22.49■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms