RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SSR3Q9UNL2 185 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 FREM2Q5SZK8 3169 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 IGKV1D-43A0A0B4J1Z2 117 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 CYTIPO60759 359 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 HRGP04196 525 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ITGB2P05107 769 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF182P17025 639 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 SRYQ05066 204 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 RGS21Q2M5E4 152 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF684Q5T5D7 378 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 CARD17Q5XLA6 110 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 SLC25A47Q6Q0C1 308 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZFP41Q8N8Y5 198 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 SLC26A10Q8NG04 563 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 OTOSQ8NHW6 89 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 PNPLA2Q96AD5 504 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 FOXN4Q96NZ1 517 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 OR2M2Q96R28 347 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 EXO5Q9H790 373 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 PNMA8CA0A1B0GUJ8 204 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF716A6NP11 495 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 RRP8O43159 456 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 TACSTD2P09758 323 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF823P16415 610 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 CD53P19397 219 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ADAM8P78325 824 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 EGR3Q06889 387 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 TEX30Q5JUR7 227 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 FCRLAQ7L513 359 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF454Q8N9F8 522 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 NDNFQ8TB73 568 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 THEM6Q8WUY1 208 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ASB17Q8WXJ9 295 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 NSMAFQ92636 917 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 TMEM54Q969K7 222 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 MCHR2Q969V1 340 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 PELI1Q96FA3 418 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF845Q96IR2 970 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 CENPOQ9BU64 300 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 TTTY10Q9BZA0 68 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 GLTPQ9NZD2 209 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 GNG8Q9UK08 70 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 KLHDC2Q9Y2U9 406 aa15.69■□□□□ 0.1
SHKBP1-224ENST00000600718 FREM3P0C091 2139 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 E9PI62 339 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 TFECO14948 347 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 SYNGR4O95473 234 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 RPS25P62851 125 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 TUBA1BP68363 451 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 USP43Q70EL4 1123 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 TUBA1AQ71U36 451 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 KBTBD8Q8NFY9 601 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 HAVCR2Q8TDQ0 301 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 EXOSC4Q9NPD3 245 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 RCE1Q9Y256 329 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 LIPGQ9Y5X9 500 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 FLVCR1Q9Y5Y0 555 aa15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 SIRT4Q9Y6E7 314 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-224ENST00000600718 METTL15A6NJ78 407 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 MAGEB4O15481 346 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 OGG1O15527 345 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 PLPP2O43688 288 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF432O94892 652 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 MPZL1O95297 269 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 IGHG3P01860 377 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 QDPRP09417 244 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 GAAP10253 952 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 CPN1P15169 458 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF24P17028 368 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 LAP3P28838 519 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 CSNK1A1P48729 337 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 PMP22Q01453 160 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 RASGEF1BQ0VAM2 473 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF169Q14929 603 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 CCDC58Q4VC31 144 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 SLC18B1Q6NT16 456 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 LRFN4Q6PJG9 635 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 TMEM123Q8N131 208 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 OR6N1Q8NGY5 312 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 TMEM203Q969S6 136 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 COQ7Q99807 217 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 AQP8O94778 261 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 KRT8P05787 483 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 SPARCP09486 303 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF133P52736 654 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 SIRPAP78324 504 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 MRPL28Q13084 256 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 PCK2Q16822 640 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 SOWAHCQ53LP3 525 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 CD200R1LQ6Q8B3 271 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 FAM220AQ7Z4H9 259 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 DYNC2LI1Q8TCX1 351 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 TTYH2Q9BSA4 534 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 DCSTAMPQ9H295 470 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 KCNG2Q9UJ96 466 aa15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 MCTS1Q9ULC4 181 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-224ENST00000600718 TRDV1A0A1B0GX56 115 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 MKRN2OSH3BPM6 223 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 K7ENP7 123 aa15.66■□□□□ 0.1
SHKBP1-224ENST00000600718 TMCC2O75069 709 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms