RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TRBV4-1A0A0J9YWV2 114 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 FAM107AO95990 144 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 CSF3P09919 207 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 PPOXP50336 477 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 SPIBQ01892 262 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 THEM4Q5T1C6 240 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 SLC25A47Q6Q0C1 308 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 CCDC197Q8NCU1 140 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 NSL1Q96IY1 281 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 RAB1BQ9H0U4 201 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 CDH20Q9HBT6 801 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 CCNB1IP1Q9NPC3 277 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 GRHPRQ9UBQ7 328 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 SLC7A8Q9UHI5 535 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 AURKCQ9UQB9 309 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 ADAM18Q9Y3Q7 739 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 UGT2A1Q9Y4X1 527 aa19.5■□□□□ 0.71
CCDC9-204ENST00000599398 IQCMA0A1B0GVH7 501 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 B2RBV5 119 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 H7C1C5 153 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 MGRN1O60291 552 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 TP53P04637 393 aaPredicted RBP19.49■□□□□ 0.71
CCDC9-204ENST00000599398 CD14P08571 375 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 CCL2P13500 99 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 PCSK6P29122 969 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 GLRXP35754 106 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 GUCA1AP43080 201 aaPredicted RBP19.49■□□□□ 0.71
CCDC9-204ENST00000599398 RPS23P62266 143 aaKnown RBP19.49■□□□□ 0.71
CCDC9-204ENST00000599398 LCN6P62502 163 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 HSF2Q03933 536 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 SEC23BQ15437 767 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 CARTPTQ16568 116 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 SPATS1Q496A3 300 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 ARIH2OSQ8N7S6 290 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 DOK1Q99704 481 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 C1orf198Q9H425 327 aa19.49■□□□□ 0.71
CCDC9-204ENST00000599398 A0A1W2PPL8 197 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 TMEM129A0AVI4 362 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 XKRYO14609 159 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 GADD45GO95257 159 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 PTHP01270 115 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 SEMG1P04279 462 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 ERCC1P07992 297 aaPredicted RBP19.48■□□□□ 0.71
CCDC9-204ENST00000599398 SLC25A16P16260 332 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 ZNF26P17031 533 aaPredicted RBP19.48■□□□□ 0.71
CCDC9-204ENST00000599398 PDLIM4P50479 330 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 SMIM11AP58511 58 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 PPP2R2BQ00005 443 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 TBC1D28Q2M2D7 210 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 C10orf105Q8TEF2 133 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 MRPL24Q96A35 216 aaKnown RBP19.48■□□□□ 0.71
CCDC9-204ENST00000599398 NABP1Q96AH0 204 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 RSRC1Q96IZ7 334 aaKnown RBP19.48■□□□□ 0.71
CCDC9-204ENST00000599398 DHRS1Q96LJ7 313 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 Q96M85 177 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 ZNF570Q96NI8 536 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 SYT3Q9BQG1 590 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 MRPL37Q9BZE1 423 aaKnown RBP19.48■□□□□ 0.71
CCDC9-204ENST00000599398 OR51B6Q9H340 312 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 FZR1Q9UM11 496 aa19.48■□□□□ 0.71
CCDC9-204ENST00000599398 NDUFB2O95178 105 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 FABP3P05413 133 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 MMP7P09237 267 aaPredicted RBP19.47■□□□□ 0.71
CCDC9-204ENST00000599398 FAM157BP0CG42 384 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 OMPP47874 163 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 LIMS1P48059 325 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 MSMPQ1L6U9 139 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 IQCCQ4KMZ1 466 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 PABPC1L2AQ5JQF8 200 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 ZCCHC24Q8N2G6 241 aaKnown RBP19.47■□□□□ 0.71
CCDC9-204ENST00000599398 OR1J2Q8NGS2 313 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 LRMDAQ9H2I8 198 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 IL20RAQ9UHF4 553 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 SIGLEC7Q9Y286 467 aa19.47■□□□□ 0.71
CCDC9-204ENST00000599398 SONP18583 2426 aaKnown RBP19.46■□□□□ 0.71
CCDC9-204ENST00000599398 CHD3Q12873 2000 aaKnown RBP19.46■□□□□ 0.71
CCDC9-204ENST00000599398 SLC22A23A1A5C7 686 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 UNC119BA6NIH7 251 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 INAFM1C9JVW0 142 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 PTP4A3O75365 173 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 ADRA2AP08913 450 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 ZNF32P17041 273 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 APEX1P27695 318 aaKnown RBP19.46■□□□□ 0.71
CCDC9-204ENST00000599398 APLNRP35414 380 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 KRTAP1-1Q07627 177 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 CYP2R1Q6VVX0 501 aa19.46■□□□□ 0.71
CCDC9-204ENST00000599398 PAQR4Q8N4S7 273 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-204ENST00000599398 TEX13CA0A0J9YWL9 993 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 CCNOP22674 350 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 CALB2P22676 271 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 LAP3P28838 519 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 RRM2P31350 389 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 MESTQ5EB52 335 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 FAM27BQ5VT28 67 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 RGS7BPQ6MZT1 257 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-204ENST00000599398 FAM122BQ7Z309 247 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 ZDHHC21Q8IVQ6 265 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 ICA1LQ8NDH6 482 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 RASD2Q96D21 266 aa19.45■□□□□ 0.7
CCDC9-204ENST00000599398 PIMREGQ9BSJ6 248 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms