RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 APLNRP35414 380 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 RPL4P36578 427 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 ALDH3B1P43353 468 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 GPR4P46093 362 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 RPL27P61353 136 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 PRKCDQ05655 676 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 MAD2L1BPQ15013 274 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 TAF11Q15544 211 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 FXNQ16595 210 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 TBC1D28Q2M2D7 210 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 ALKBH6Q3KRA9 238 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 CHRFAM7AQ494W8 412 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 NRN1LQ496H8 165 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 C10orf128Q5T292 105 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 RGS7BPQ6MZT1 257 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 C16orf89Q6UX73 402 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 HIPK1Q86Z02 1210 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 PAQR4Q8N4S7 273 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 CLDN22Q8N7P3 220 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF540Q8NDQ6 660 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 OR1J2Q8NGS2 313 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 OR13C2Q8NGS9 318 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 UBASH3BQ8TF42 649 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 ACOT11Q8WXI4 607 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 NSL1Q96IY1 281 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 RBP7Q96R05 134 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 SEPHS2Q99611 448 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 LRMDAQ9H2I8 198 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 MS4A5Q9H3V2 200 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 C1orf198Q9H425 327 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 NMNAT1Q9HAN9 279 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 SIAEQ9HAT2 523 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 NDUFAF4Q9P032 175 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 REV1Q9UBZ9 1251 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 HIVEP2P31629 2446 aa10.93□□□□□ -0.66
NPLOC4-213ENST00000573519 IGKV1D-43A0A0B4J1Z2 117 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 A0A1W2PPL8 197 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 NPIPB13A6NJU9 1138 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 B2RBV5 119 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 NPIPB4C9JG80 1138 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 ARPC2O15144 300 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 HSD17B1P14061 328 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 APEX1P27695 318 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 EVX1P49640 407 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 GZMKP49863 264 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 MRPS34P82930 218 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 NKPD1Q17RQ9 610 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 PODNL1Q6PEZ8 512 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 RNF113BQ8IZP6 322 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 C7orf34Q96L11 122 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 TSPAN32Q96QS1 320 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 GORASP2Q9H8Y8 452 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 CHODLQ9H9P2 273 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 SMURF2Q9HAU4 748 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 MAGEL2Q9UJ55 1249 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 SAMD4AQ9UPU9 718 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 FAM32AQ9Y421 112 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 UGT2A1Q9Y4X1 527 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 PLCE1Q9P212 2302 aa10.92□□□□□ -0.66
NPLOC4-213ENST00000573519 LOC100289279A0A1B0GTE1 492 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 LRP5LA4QPB2 252 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 A6NIZ1 184 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 H7C1C5 153 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 IGHMP01871 453 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 H1F0P07305 194 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 IGFBP1P08833 259 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 MMP7P09237 267 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 NAT2P11245 290 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF23P17027 643 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF32P17041 273 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 RAD52P43351 418 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 SLC9A3P48764 834 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 MNAT1P51948 309 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF133P52736 654 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 SELENOVP59797 346 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 RAP1BP61224 184 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ERVS71-1P61550 626 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 LCN6P62502 163 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 RAP1AP62834 184 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ERVK-25P63136 954 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 THEM4Q5T1C6 240 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 SLC25A47Q6Q0C1 308 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 RINLQ6ZS11 566 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 ZNF786Q8N393 782 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 LRRC75AQ8NAA5 344 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 CPEB3Q8NE35 698 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 OR52J3Q8NH60 311 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 SYNPRQ8TBG9 265 aa10.91□□□□□ -0.66
NPLOC4-213ENST00000573519 SLC7A13Q8TCU3 470 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms