RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PRR31Q5SQ13 230 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 ARMC4Q5T2S8 1044 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 RGS7BPQ6MZT1 257 aaPredicted RBP13.9□□□□□ -0.18
DDX55-212ENST00000544738 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 RBM15BQ8NDT2 890 aaKnown RBP13.9□□□□□ -0.18
DDX55-212ENST00000544738 FNDC8Q8TC99 324 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 BPIFA2Q96DR5 249 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
DDX55-212ENST00000544738 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 TXNIPQ9H3M7 391 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 TPK1Q9H3S4 243 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 SIAEQ9HAT2 523 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 ARMCX1Q9P291 453 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 DUSP13Q9UII6 198 aa13.9□□□□□ -0.18
DDX55-212ENST00000544738 NOTCH1P46531 2555 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 SNAP29O95721 258 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 IFNW1P05000 195 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 COX4I1P13073 169 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
DDX55-212ENST00000544738 RAD52P43351 418 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 RIN1Q13671 783 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 ALG10Q5BKT4 473 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 PEG10Q86TG7 708 aaKnown RBP13.89□□□□□ -0.19
DDX55-212ENST00000544738 SLC15A3Q8IY34 581 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 MOSPD2Q8NHP6 518 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 ZNF418Q8TF45 676 aaPredicted RBP13.89□□□□□ -0.19
DDX55-212ENST00000544738 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 RBP7Q96R05 134 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 FNDC11Q9BVV2 318 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 EFCAB1Q9HAE3 211 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 MED4Q9NPJ6 270 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 CMTM6Q9NX76 183 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 A4GNTQ9UNA3 340 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
DDX55-212ENST00000544738 A0A1W2PPW3 197 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 NDUFAB1O14561 156 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 GSTA4O15217 222 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 LILRA1O75019 489 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 IFI30P13284 250 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
DDX55-212ENST00000544738 LIPEQ05469 1076 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 TRAM2Q15035 370 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 MOGQ16653 247 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 FAM205BPQ63HN1 556 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 LRP11Q86VZ4 500 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 RNF113BQ8IZP6 322 aaKnown RBP13.88□□□□□ -0.19
DDX55-212ENST00000544738 OFCC1Q8IZS5 231 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 LRRC18Q8N456 261 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 ZNF519Q8TB69 540 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 GEMIN6Q8WXD5 167 aaKnown RBP13.88□□□□□ -0.19
DDX55-212ENST00000544738 C11orf40Q8WZ69 217 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 RDH5Q92781 318 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 BCL2L14Q9BZR8 327 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
DDX55-212ENST00000544738 TRIM77I1YAP6 450 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 CXCR6O00574 342 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 TMPRSS2O15393 492 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 MMP7P09237 267 aaPredicted RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 FAM157BP0CG42 384 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 SAGP10523 405 aaPredicted RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 ZNF250P15622 560 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 ACHEP22303 614 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 APLNRP35414 380 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 GUCA1AP43080 201 aaPredicted RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 ALDH3B1P43353 468 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 SEC24CP53992 1094 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 UCP2P55851 309 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 KLF3P57682 345 aaPredicted RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 RPL27P61353 136 aaKnown RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 HSF2Q03933 536 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 CD47Q08722 323 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 NKPD1Q17RQ9 610 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 MIDNQ504T8 468 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 THEM4Q5T1C6 240 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 FKBP9P1Q75LS8 142 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 SYNPRQ8TBG9 265 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
DDX55-212ENST00000544738 SNX18Q96RF0 628 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 ALG12Q9BV10 488 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 SLCO1C1Q9NYB5 712 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 FZR1Q9UM11 496 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 PCDHGB1Q9Y5G3 927 aa13.87□□□□□ -0.19
DDX55-212ENST00000544738 IGLV3-9A0A075B6K5 115 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 A6NIZ1 184 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 LYNX1G3V0Z9 82 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 SLC2A10O95528 541 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 ZNF682O95780 498 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 HPXP02790 462 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 LCKP06239 509 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 LYNX1P0DP58 116 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 CCL2P13500 99 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 TCN1P20061 433 aaPredicted RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 YAP1P46937 504 aaKnown RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 SLC9A3P48764 834 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 SLC7A2P52569 658 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms