RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 STXBP6Q8NFX7 210 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 CNRIP1Q96F85 164 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 NODALQ96S42 347 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ATF6BQ99941 703 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 TTYH2Q9BSA4 534 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 RBM4Q9BWF3 364 aaKnown RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 DUSP16Q9BY84 665 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 HES7Q9BYE0 225 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 NCOR1P1Q9H4R4 102 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 MEAF6Q9HAF1 191 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ESM1Q9NQ30 184 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 UFSP2Q9NUQ7 469 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 GNG12Q9UBI6 72 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TRBV5-4A0A0C4DH59 114 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 EEF1E1-BLOC1S5C9J1V9 151 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 E7EQ34 232 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 KLRC4-KLRK1H3BQV0 150 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 SCAMP2O15127 329 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 EEF1E1O43324 174 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF749O43361 778 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 IVLP07476 585 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 HOXC4P09017 264 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 SLC2A3P11169 496 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 CPN1P15169 458 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ATP5A1P25705 553 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 CDH4P55283 916 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 DCDP81605 110 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 VLDLRP98155 873 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAD51Q06609 339 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 RIPPLY1Q0D2K3 151 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMEM187Q14656 261 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 KCTD21Q4G0X4 260 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM76BQ5HYJ3 339 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 WDR25Q64LD2 544 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 PYHIN1Q6K0P9 492 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ARHGAP11AQ6P4F7 1023 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 WDR59Q6PJI9 974 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 HACD2Q6Y1H2 254 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMUB2Q71RG4 321 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 APTXQ7Z2E3 356 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TRPM8Q7Z2W7 1104 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 HSD11B1LQ7Z5J1 315 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 DHRSXQ8N5I4 330 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF614Q8N883 585 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR4F17Q8NGA8 305 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR11G2Q8NGC1 345 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 NANPQ8TBE9 248 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF418Q8TF45 676 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 AENQ8WTP8 325 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 NT5C3BQ969T7 300 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 SERPINB11Q96P15 392 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR4F4Q96R69 305 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 PSMB7Q99436 277 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ST6GALNAC5Q9BVH7 336 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 BARHL1Q9BZE3 327 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 PARVGQ9HBI0 331 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 IL1RAPQ9NPH3 570 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TXLNGQ9NUQ3 528 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 TAS2R16Q9NYV7 291 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 DHCR7Q9UBM7 475 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 PCSK1NQ9UHG2 260 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 MRPS28Q9Y2Q9 187 aaKnown RBP3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 RNF115Q9Y4L5 304 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 STYXL1Q9Y6J8 313 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 ARHGAP21Q5T5U3 1957 aa3.81□□□□□ -1.8
HMGB1P23-201ENST00000518743 NSG1A0A0A6YYJ2 146 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 LCE6AA0A183 80 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR5K4A6NMS3 321 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ARHGEF33A8MVX0 844 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 A8MX80 341 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 POP4O95707 220 aaKnown RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 HPP00738 406 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGFBP1P08833 259 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCDC159P0C7I6 412 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 TPSB2P20231 275 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 RPL4P36578 427 aaKnown RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 RFC3P40938 356 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 NSG1P42857 185 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 MFAP2P55001 183 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 GTF2BQ00403 316 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 OC90Q02509 493 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF146Q15072 292 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 TPSAB1Q15661 275 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZFP69Q49AA0 526 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 PHYHD1Q5SRE7 291 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 LINC00242Q5T6M2 205 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 MEDAGQ5VYS4 303 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM71F2Q6NXP2 309 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 Q6ZRP5 223 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 UTS2BQ765I0 119 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 LRRTM1Q86UE6 522 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 UNC93AQ86WB7 457 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms