RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 MELKQ14680 651 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 KRT72Q14CN4 511 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 ELFN2Q5R3F8 820 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 FAM27BQ5VT28 67 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 DEF8Q6ZN54 512 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 CCDC121Q6ZUS5 278 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 FOXL2NBQ6ZUU3 175 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 HDDC2Q7Z4H3 204 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 LRP11Q86VZ4 500 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 TREML1Q86YW5 311 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 RNF113BQ8IZP6 322 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 OFCC1Q8IZS5 231 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 NOXO1Q8NFA2 376 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 BPIFA2Q96DR5 249 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 SOX7Q9BT81 388 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 C1orf198Q9H425 327 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 MYEF2Q9P2K5 600 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 A0A087WUU8 490 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 IGKV1D-43A0A0B4J1Z2 117 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC22A23A1A5C7 686 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 RP2O75695 350 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 PTHP01270 115 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 UMPSP11172 480 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 COX4I1P13073 169 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 MAKP20794 623 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 IGFBP5P24593 272 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 RASSF2P50749 326 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF84P51523 738 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 UCP2P55851 309 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 TMEM33P57088 247 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 CLRN1P58418 232 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 TRAM2Q15035 370 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC36A2Q495M3 483 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 LRRC23Q53EV4 343 aaPredicted RBP8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 FAM166AQ6J272 317 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 TMPRSS11FQ6ZWK6 438 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 CBLL1Q75N03 491 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 VTCN1Q7Z7D3 282 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 SYT14Q8NB59 555 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC30A7Q8NEW0 376 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF519Q8TB69 540 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 LZICQ8WZA0 190 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 ALG12Q9BV10 488 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 BEX2Q9BXY8 128 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 EFCAB1Q9HAE3 211 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 DYNLRB1Q9NP97 96 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 NKIRAS2Q9NYR9 191 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 ABCD2Q9UBJ2 740 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 TAGLN3Q9UI15 199 aa8.33□□□□□ -1.08
TMEM39A-210ENST00000490099 LOC100289279A0A1B0GTE1 492 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 SH3PXD2BA1X283 911 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 LRP5LA4QPB2 252 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 CXCR6O00574 342 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 AHCYL1O43865 530 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC2A10O95528 541 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 HPXP02790 462 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 IFNW1P05000 195 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 IFI30P13284 250 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF26P17031 533 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 CALB2P22676 271 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 COL8A2P25067 703 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 RAD52P43351 418 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC9A3P48764 834 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 GSK3BP49841 420 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 CHN2P52757 468 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 RPL27P61353 136 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 MYBPC1Q00872 1141 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 GALK2Q01415 458 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZSCAN26Q16670 478 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 IQCCQ4KMZ1 466 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ALG10Q5BKT4 473 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 FAM120AOSQ5T036 256 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 THEM4Q5T1C6 240 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 FAM205BPQ63HN1 556 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 TMEM53Q6P2H8 277 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 SLC16A14Q7RTX9 510 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 NRMQ8IXM6 262 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ARIH2OSQ8N7S6 290 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 OR1J2Q8NGS2 313 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 FNDC8Q8TC99 324 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 GEMIN6Q8WXD5 167 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ACOT11Q8WXI4 607 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 RDH5Q92781 318 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ITPKCQ96DU7 683 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 TPD52L3Q96J77 140 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 POM121L2Q96KW2 1035 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 SYT3Q9BQG1 590 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF416Q9BWM5 594 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 BCL2L14Q9BZR8 327 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ANKRD19PQ9H560 264 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 CHODLQ9H9P2 273 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 NDE1Q9NXR1 346 aa8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF346Q9UL40 294 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-210ENST00000490099 LOC100509620A0A075B734 347 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms