RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FOXI3A8MTJ6 420 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 BBIP1A8MTZ0 92 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LINC00587B1AMM8 73 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ERVV-1B6SEH8 477 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 I3L521 148 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 KPNA3O00505 521 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CYB561D2O14569 222 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LRRTM2O43300 516 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PLIN3O60664 434 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PROSCO94903 275 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TDP2O95551 362 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 NPPAP01160 153 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 IFNA7P01567 189 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PCCBP05166 539 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 FABP1P07148 127 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MELTFP08582 738 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HTR1AP08908 422 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SNRPCP09234 159 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RBP1P09455 135 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 GNAO1P09471 354 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HLA-EP13747 358 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SPI1P17947 270 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RAB4AP20338 218 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CYP2F1P24903 491 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CCR1P32246 355 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RFC2P35250 354 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ELK3P41970 407 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 BRCC3P46736 316 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC7A2P52569 658 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HSPA2P54652 639 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 AP1S1P61966 158 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TIMM10P62072 90 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 YWHAEP62258 255 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HERVK_113P63132 956 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ERVK-8P63133 956 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 GTF2BQ00403 316 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SCGB2A2Q13296 93 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ART3Q13508 389 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MESDQ14696 234 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 NCF4Q15080 339 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PON2Q15165 354 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CCL14Q16627 93 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PCK2Q16822 640 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MICBQ29980 383 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LRRC26Q2I0M4 334 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ACSF3Q4G176 576 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 KLHL12Q53G59 568 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 COQ5Q5HYK3 327 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC25A30Q5SVS4 291 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TPRG1LQ5T0D9 272 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SPATA46Q5T0L3 261 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LRRC66Q68CR7 880 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LAMTOR1Q6IAA8 161 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SCARA5Q6ZMJ2 495 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PAGE2Q7Z2X7 111 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HIPK1Q86Z02 1210 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM71AQ8IYT1 594 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PDIK1LQ8N165 341 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 STX19Q8N4C7 294 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TBC1D19Q8N5T2 526 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 OR8J1Q8NGP2 316 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 NDNFQ8TB73 568 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 THRSPQ92748 146 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 KIAA1143Q96AT1 154 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PINX1Q96BK5 328 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PIWIL1Q96J94 861 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MBOAT7Q96N66 472 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 HOPXQ9BPY8 73 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SEC22CQ9BRL7 303 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TCEAL7Q9BRU2 100 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 LXNQ9BS40 222 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 TTYH2Q9BSA4 534 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ERVK-6Q9BXR3 956 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 C20orf27Q9GZN8 174 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC22A4Q9H015 551 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RACGAP1Q9H0H5 632 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 DNTTIP1Q9H147 329 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 DUSP21Q9H596 190 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 C11orf49Q9H6J7 331 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CALHM2Q9HA72 323 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 IL1RL2Q9HB29 575 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CCNB1IP1Q9NPC3 277 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 BIN3Q9NQY0 253 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ABCB10Q9NRK6 738 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 DMAC2Q9NW81 257 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 GPR83Q9NYM4 423 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 GCNT4Q9P109 453 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ABCD2Q9UBJ2 740 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 EMCNQ9ULC0 261 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 CLEC4AQ9UMR7 237 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 ERVW-1Q9UQF0 538 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PDE10AQ9Y233 779 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPS7Q9Y2R9 242 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 RNF115Q9Y4L5 304 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 MAB21L2Q9Y586 359 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 DUOX1Q9NRD9 1551 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms