RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	NTF4	P34130	210 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	CAPG	P40121	348 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	HSPA13	P48723	471 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	CSNK1A1	P48729	337 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	CLRN1	P58418	232 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	CDC42	P60953	191 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	LCN6	P62502	163 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	ADARB1	P78563	741 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	RUNX1T1	Q06455	604 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	C12orf73	Q69YU5	71 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	LEG1	Q6P5S2	330 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	SYT14	Q8NB59	555 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	SDR9C7	Q8NEX9	313 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	NOXO1	Q8NFA2	376 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR6N1	Q8NGY5	312 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	HDAC2	Q92769	488 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF566	Q969W8	418 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	APH1A	Q96BI3	265 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	OTULIN	Q96BN8	352 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	PIK3IP1	Q96FE7	263 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC25A44	Q96H78	314 aa	Predicted RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	HRASLS5	Q96KN8	279 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991		Q96MF0	132 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	PITX2	Q99697	317 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	USB1	Q9BQ65	265 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	HDHD5	Q9BXW7	423 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR10A4	Q9H209	315 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	UBTD1	Q9HAC8	227 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	IMPAD1	Q9NX62	359 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	NDRG4	Q9ULP0	352 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	GPR52	Q9Y2T5	361 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	JMJD1C	Q15652	2540 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	TRIM64	A6NGJ6	449 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	TRIM64B	A6NI03	449 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991		H0YAE9	185 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CLIC3	O95833	236 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	REN	P00797	406 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	IGHV3-9	P01782	118 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	THBD	P07204	575 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	PGA4	P0DJD7	388 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	PGA3	P0DJD8	388 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF3	P17036	446 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CRYGS	P22914	178 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CDKN2A	P42771	156 aa	Known RBP	11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CD47	Q08722	323 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CRMP1	Q14194	572 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	SHE	Q5VZ18	495 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	TFAP2E	Q6VUC0	442 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	STAC2	Q6ZMT1	411 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	PTCHD4	Q6ZW05	846 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	ADCK1	Q86TW2	530 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	TMEM123	Q8N131	208 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	TCEANC	Q8N8B7	351 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CYB561A3	Q8NBI2	242 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC37A3	Q8NCC5	494 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	PERP	Q96FX8	193 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	HS3ST6	Q96QI5	342 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	NMNAT3	Q96T66	252 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF184	Q99676	751 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	APOL4	Q9BPW4	351 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	CMC2	Q9NRP2	79 aa		11.48	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC22A23	A1A5C7	686 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	PRSS37	A4D1T9	235 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	FAM183A	A6NL82	134 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991		E9PQ18	207 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991		M0R3G1	203 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	TLX2	O43763	284 aa	Predicted RBP	11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	PRKY	O43930	277 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	SMPD2	O60906	423 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	KRT33A	O76009	404 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF432	O94892	652 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR3A2	P47893	321 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	IL5RA	Q01344	420 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	LGALS3BP	Q08380	585 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	ITGAD	Q13349	1161 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	TSPO2	Q5TGU0	170 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	C20orf196	Q8IYI0	205 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	GABRG1	Q8N1C3	465 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	DEPDC4	Q8N2C3	294 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	UBE2J2	Q8N2K1	259 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	GPR137C	Q8N3F9	429 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	NPEPL1	Q8NDH3	523 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	STEAP2	Q8NFT2	490 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	TFAP2C	Q92754	450 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	TMEM54	Q969K7	222 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	UBE2F	Q969M7	185 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	COX4I2	Q96KJ9	171 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	RBP7	Q96R05	134 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	IL4I1	Q96RQ9	567 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	KCNK17	Q96T54	332 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	ALG12	Q9BV10	488 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	MRPL13	Q9BYD1	178 aa	Known RBP	11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLCO5A1	Q9H2Y9	848 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	FN3K	Q9H479	309 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	RERGL	Q9H628	205 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	MED20	Q9H944	212 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	B3GAT2	Q9NPZ5	323 aa		11.47	□□□□□ -0.57
NR1H3-223	ENST00000486991	UPB1	Q9UBR1	384 aa		11.47	□□□□□ -0.57

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